Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 KRT8P6-201ENST00000399259 1207 ntBASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 PSME2P2-201ENST00000453033 700 ntBASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 GULOP-201ENST00000454030 748 ntBASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 VDAC1P11-201ENST00000458323 852 ntBASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 AL049840.2-201ENST00000602722 535 ntBASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 SALL4P6-201ENST00000429385 1691 ntBASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
C9orf50Q5SZB4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 AC232323.1-201ENST00000540724 2099 ntBASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 U73169.1-201ENST00000395152 367 ntBASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 RPL10-203ENST00000406022 748 ntTSL 3 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 RN7SKP212-201ENST00000410851 328 ntBASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 CCND3P1-201ENST00000438347 580 ntBASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 RN7SL684P-201ENST00000465665 294 ntBASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 AC120498.5-201ENST00000561757 299 ntBASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 PRR20FP-201ENST00000603320 180 ntBASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.1■□□□□ 0.01
C9orf50Q5SZB4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf50Q5SZB4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
C9orf50Q5SZB4 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf50Q5SZB4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf50Q5SZB4 AC092115.1-201ENST00000566277 1402 ntBASIC15.09■□□□□ 0.01
C9orf50Q5SZB4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf50Q5SZB4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.09■□□□□ 0.01
C9orf50Q5SZB4 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC15.09■□□□□ 0.01
C9orf50Q5SZB4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
C9orf50Q5SZB4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf50Q5SZB4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.09■□□□□ 0.01
C9orf50Q5SZB4 AL121753.2-201ENST00000624581 1461 ntBASIC15.09■□□□□ 0.01
C9orf50Q5SZB4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C9orf50Q5SZB4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms