Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 LINC01783-202ENST00000614408 828 ntBASIC17.31■□□□□ 0.36
RFX7Q2KHR2 BX284668.2-205ENST00000619677 828 ntBASIC17.31■□□□□ 0.36
RFX7Q2KHR2 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 AC068587.6-202ENST00000641839 5619 ntBASIC17.3■□□□□ 0.36
RFX7Q2KHR2 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 AL627231.1-201ENST00000394467 1125 ntBASIC17.3■□□□□ 0.36
RFX7Q2KHR2 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 AC078991.1-201ENST00000437297 610 ntBASIC17.3■□□□□ 0.36
RFX7Q2KHR2 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 RPL17P45-201ENST00000586289 509 ntBASIC17.3■□□□□ 0.36
RFX7Q2KHR2 AC092171.5-201ENST00000608012 942 ntBASIC17.3■□□□□ 0.36
RFX7Q2KHR2 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 COX6A1P2-201ENST00000620597 330 ntBASIC17.3■□□□□ 0.36
RFX7Q2KHR2 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 AC074138.1-201ENST00000611182 1303 ntBASIC17.3■□□□□ 0.36
RFX7Q2KHR2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 SNX18-202ENST00000343017 3140 ntBASIC17.3■□□□□ 0.36
RFX7Q2KHR2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX7Q2KHR2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 AL583805.1-201ENST00000391389 531 ntBASIC17.29■□□□□ 0.36
RFX7Q2KHR2 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 BANF1P3-201ENST00000412556 261 ntBASIC17.29■□□□□ 0.36
RFX7Q2KHR2 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 RPSAP15-201ENST00000448168 861 ntBASIC17.29■□□□□ 0.36
RFX7Q2KHR2 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 DUTP3-201ENST00000450025 415 ntBASIC17.29■□□□□ 0.36
RFX7Q2KHR2 AC008723.1-201ENST00000506922 207 ntBASIC17.29■□□□□ 0.36
RFX7Q2KHR2 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 MIR4522-201ENST00000584932 87 ntBASIC17.29■□□□□ 0.36
RFX7Q2KHR2 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 AC087045.2-201ENST00000606279 1003 ntBASIC17.29■□□□□ 0.36
RFX7Q2KHR2 MIR6842-201ENST00000612539 65 ntBASIC17.29■□□□□ 0.36
RFX7Q2KHR2 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms