Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S1P61966 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S1P61966 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
AP1S1P61966 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
AP1S1P61966 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.53□□□□□ -0.08
AP1S1P61966 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.53□□□□□ -0.08
AP1S1P61966 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
AP1S1P61966 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.53□□□□□ -0.08
AP1S1P61966 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.53□□□□□ -0.08
AP1S1P61966 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.53□□□□□ -0.08
AP1S1P61966 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.53□□□□□ -0.08
AP1S1P61966 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.53□□□□□ -0.08
AP1S1P61966 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.53□□□□□ -0.08
AP1S1P61966 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.53□□□□□ -0.08
AP1S1P61966 CYP46A4P-201ENST00000414953 267 ntBASIC14.53□□□□□ -0.08
AP1S1P61966 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.53□□□□□ -0.08
AP1S1P61966 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.53□□□□□ -0.08
AP1S1P61966 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.53□□□□□ -0.08
AP1S1P61966 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.53□□□□□ -0.08
AP1S1P61966 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.53□□□□□ -0.08
AP1S1P61966 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.53□□□□□ -0.08
AP1S1P61966 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.53□□□□□ -0.08
AP1S1P61966 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
AP1S1P61966 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
AP1S1P61966 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
AP1S1P61966 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.53□□□□□ -0.08
AP1S1P61966 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
AP1S1P61966 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP1S1P61966 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
AP1S1P61966 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
AP1S1P61966 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP1S1P61966 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
AP1S1P61966 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.52□□□□□ -0.08
AP1S1P61966 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
AP1S1P61966 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.52□□□□□ -0.08
AP1S1P61966 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.52□□□□□ -0.09
AP1S1P61966 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.52□□□□□ -0.09
AP1S1P61966 ISCA2P1-201ENST00000425548 448 ntBASIC14.52□□□□□ -0.09
AP1S1P61966 AC005077.2-201ENST00000449786 690 ntBASIC14.52□□□□□ -0.09
AP1S1P61966 RN7SL11P-201ENST00000471305 293 ntBASIC14.52□□□□□ -0.09
AP1S1P61966 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.52□□□□□ -0.09
AP1S1P61966 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.52□□□□□ -0.09
AP1S1P61966 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.52□□□□□ -0.09
AP1S1P61966 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.52□□□□□ -0.09
AP1S1P61966 AL512310.5-201ENST00000551999 515 ntBASIC14.52□□□□□ -0.09
AP1S1P61966 ACTG1P17-201ENST00000558391 1119 ntBASIC14.52□□□□□ -0.09
AP1S1P61966 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.52□□□□□ -0.09
AP1S1P61966 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.52□□□□□ -0.09
AP1S1P61966 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.52□□□□□ -0.09
AP1S1P61966 AL139099.5-201ENST00000635274 300 ntBASIC14.52□□□□□ -0.09
AP1S1P61966 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
AP1S1P61966 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 AC016397.2-201ENST00000624848 1985 ntBASIC14.52□□□□□ -0.09
AP1S1P61966 AL009178.2-201ENST00000597278 2719 ntBASIC14.52□□□□□ -0.09
AP1S1P61966 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
AP1S1P61966 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms