Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC61A1P61619 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SEC61A1P61619 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
SEC61A1P61619 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC61A1P61619 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 AL118506.1-201ENST00000601296 3082 ntBASIC12.79□□□□□ -0.36
SEC61A1P61619 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC61A1P61619 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.79□□□□□ -0.36
SEC61A1P61619 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.79□□□□□ -0.36
SEC61A1P61619 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.79□□□□□ -0.36
SEC61A1P61619 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC61A1P61619 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.79□□□□□ -0.36
SEC61A1P61619 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC61A1P61619 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.79□□□□□ -0.36
SEC61A1P61619 AC022137.2-201ENST00000503482 481 ntBASIC12.79□□□□□ -0.36
SEC61A1P61619 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.79□□□□□ -0.36
SEC61A1P61619 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC61A1P61619 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.79□□□□□ -0.36
SEC61A1P61619 AC244669.2-201ENST00000612320 853 ntBASIC12.79□□□□□ -0.36
SEC61A1P61619 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC61A1P61619 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SEC61A1P61619 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC61A1P61619 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SEC61A1P61619 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SEC61A1P61619 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SEC61A1P61619 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.79□□□□□ -0.36
SEC61A1P61619 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.79□□□□□ -0.36
SEC61A1P61619 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SEC61A1P61619 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SEC61A1P61619 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SEC61A1P61619 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SEC61A1P61619 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC61A1P61619 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC61A1P61619 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC61A1P61619 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC61A1P61619 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC61A1P61619 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SEC61A1P61619 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
SEC61A1P61619 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC61A1P61619 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SEC61A1P61619 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC61A1P61619 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 RNU1-114P-201ENST00000365297 166 ntBASIC12.78□□□□□ -0.36
SEC61A1P61619 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SEC61A1P61619 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC61A1P61619 AC092933.1-201ENST00000393644 945 ntBASIC12.78□□□□□ -0.36
SEC61A1P61619 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC61A1P61619 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 KRT223P-202ENST00000449164 1292 ntBASIC12.78□□□□□ -0.36
SEC61A1P61619 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.78□□□□□ -0.36
SEC61A1P61619 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
SEC61A1P61619 AC104989.1-201ENST00000519711 778 ntBASIC12.78□□□□□ -0.36
SEC61A1P61619 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.78□□□□□ -0.36
SEC61A1P61619 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.78□□□□□ -0.36
SEC61A1P61619 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC61A1P61619 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC61A1P61619 AC133552.6-201ENST00000613406 534 ntBASIC12.78□□□□□ -0.36
SEC61A1P61619 BX539320.1-201ENST00000623759 877 ntBASIC12.78□□□□□ -0.36
SEC61A1P61619 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SEC61A1P61619 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC61A1P61619 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC61A1P61619 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC61A1P61619 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.78□□□□□ -0.36
SEC61A1P61619 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms