Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CDC42P60953 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.3□□□□□ -0.28
CDC42P60953 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CDC42P60953 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC42P60953 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.3□□□□□ -0.28
CDC42P60953 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
CDC42P60953 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.3□□□□□ -0.28
CDC42P60953 Z82170.1-201ENST00000625081 3192 ntBASIC13.3□□□□□ -0.28
CDC42P60953 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CDC42P60953 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 AL391647.1-201ENST00000395664 511 ntBASIC13.3□□□□□ -0.28
CDC42P60953 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.3□□□□□ -0.28
CDC42P60953 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.3□□□□□ -0.28
CDC42P60953 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.3□□□□□ -0.28
CDC42P60953 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.3□□□□□ -0.28
CDC42P60953 AL589987.1-201ENST00000453380 819 ntBASIC13.3□□□□□ -0.28
CDC42P60953 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 HLA-J-203ENST00000494367 1087 ntBASIC13.3□□□□□ -0.28
CDC42P60953 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC42P60953 Z92544.3-201ENST00000624747 417 ntBASIC13.3□□□□□ -0.28
CDC42P60953 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC42P60953 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC42P60953 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC42P60953 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 AL805961.2-201ENST00000642139 4817 ntBASIC13.3□□□□□ -0.28
CDC42P60953 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC42P60953 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CDC42P60953 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 AC100757.3-201ENST00000622361 1406 ntBASIC13.3□□□□□ -0.28
CDC42P60953 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC42P60953 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC42P60953 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CDC42P60953 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CDC42P60953 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 AC009474.1-201ENST00000455096 1565 ntBASIC13.29□□□□□ -0.28
CDC42P60953 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC42P60953 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 INTS4P2-202ENST00000614726 2019 ntBASIC13.29□□□□□ -0.28
CDC42P60953 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CDC42P60953 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CDC42P60953 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC42P60953 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CDC42P60953 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 USP17L6P-201ENST00000382470 1197 ntBASIC13.29□□□□□ -0.28
CDC42P60953 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
CDC42P60953 AC107890.1-201ENST00000422478 521 ntBASIC13.29□□□□□ -0.28
CDC42P60953 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CDC42P60953 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.29□□□□□ -0.28
CDC42P60953 AC004967.1-201ENST00000453589 447 ntBASIC13.29□□□□□ -0.28
CDC42P60953 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.29□□□□□ -0.28
CDC42P60953 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.29□□□□□ -0.28
CDC42P60953 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 AC120045.2-201ENST00000567334 178 ntBASIC13.29□□□□□ -0.28
CDC42P60953 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.29□□□□□ -0.28
CDC42P60953 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC42P60953 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.29□□□□□ -0.28
CDC42P60953 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.29□□□□□ -0.28
CDC42P60953 BEND3P3-201ENST00000611030 2440 ntBASIC13.29□□□□□ -0.28
CDC42P60953 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CDC42P60953 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.29□□□□□ -0.28
CDC42P60953 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC42P60953 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms