Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
CMC4P56277 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC10.79□□□□□ -0.68
CMC4P56277 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC10.79□□□□□ -0.68
CMC4P56277 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
CMC4P56277 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC10.79□□□□□ -0.68
CMC4P56277 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CMC4P56277 AL731571.1-201ENST00000617058 5428 ntBASIC10.79□□□□□ -0.68
CMC4P56277 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CMC4P56277 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC10.78□□□□□ -0.68
CMC4P56277 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CMC4P56277 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.78□□□□□ -0.68
CMC4P56277 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC10.78□□□□□ -0.68
CMC4P56277 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC10.78□□□□□ -0.68
CMC4P56277 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC10.78□□□□□ -0.68
CMC4P56277 GOLGA8VP-201ENST00000559009 1798 ntBASIC10.78□□□□□ -0.68
CMC4P56277 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC10.78□□□□□ -0.68
CMC4P56277 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC10.78□□□□□ -0.68
CMC4P56277 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC10.78□□□□□ -0.68
CMC4P56277 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CMC4P56277 AGER-203ENST00000375065 665 ntTSL 2 BASIC10.78□□□□□ -0.68
CMC4P56277 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 GPAA1P2-201ENST00000417923 928 ntBASIC10.78□□□□□ -0.68
CMC4P56277 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC10.78□□□□□ -0.68
CMC4P56277 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC10.78□□□□□ -0.68
CMC4P56277 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC10.78□□□□□ -0.68
CMC4P56277 POU5F1P2-201ENST00000521750 823 ntBASIC10.78□□□□□ -0.68
CMC4P56277 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC10.78□□□□□ -0.68
CMC4P56277 PACS1-203ENST00000524815 628 ntTSL 4 BASIC10.78□□□□□ -0.68
CMC4P56277 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC10.78□□□□□ -0.68
CMC4P56277 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC10.78□□□□□ -0.68
CMC4P56277 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
CMC4P56277 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC10.78□□□□□ -0.68
CMC4P56277 MIR4783-201ENST00000580343 82 ntBASIC10.78□□□□□ -0.68
CMC4P56277 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
CMC4P56277 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC10.78□□□□□ -0.68
CMC4P56277 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CMC4P56277 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC10.78□□□□□ -0.68
CMC4P56277 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC10.78□□□□□ -0.68
CMC4P56277 AC091544.8-201ENST00000619490 361 ntBASIC10.78□□□□□ -0.68
CMC4P56277 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
CMC4P56277 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CMC4P56277 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CMC4P56277 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CMC4P56277 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CMC4P56277 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CMC4P56277 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CMC4P56277 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
CMC4P56277 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
CMC4P56277 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.77□□□□□ -0.68
CMC4P56277 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms