Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 NUP210P1-202ENST00000504322 710 ntBASIC12.65□□□□□ -0.38
FOXG1P55316 MIR3619-201ENST00000579667 83 ntBASIC12.65□□□□□ -0.38
FOXG1P55316 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.65□□□□□ -0.38
FOXG1P55316 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXG1P55316 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXG1P55316 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXG1P55316 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXG1P55316 AC138627.1-207ENST00000641560 1006 ntBASIC12.65□□□□□ -0.38
FOXG1P55316 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
FOXG1P55316 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXG1P55316 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
FOXG1P55316 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXG1P55316 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FOXG1P55316 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXG1P55316 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
FOXG1P55316 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
FOXG1P55316 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
FOXG1P55316 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXG1P55316 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXG1P55316 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.65□□□□□ -0.38
FOXG1P55316 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.65□□□□□ -0.38
FOXG1P55316 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 CCT8L1P-201ENST00000465400 1674 ntBASIC12.64□□□□□ -0.39
FOXG1P55316 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.64□□□□□ -0.39
FOXG1P55316 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.64□□□□□ -0.39
FOXG1P55316 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
FOXG1P55316 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.64□□□□□ -0.39
FOXG1P55316 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 AL008707.1-201ENST00000422498 534 ntBASIC12.64□□□□□ -0.39
FOXG1P55316 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.64□□□□□ -0.39
FOXG1P55316 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.64□□□□□ -0.39
FOXG1P55316 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.64□□□□□ -0.39
FOXG1P55316 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.64□□□□□ -0.39
FOXG1P55316 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.64□□□□□ -0.39
FOXG1P55316 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.64□□□□□ -0.39
FOXG1P55316 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.64□□□□□ -0.39
FOXG1P55316 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.64□□□□□ -0.39
FOXG1P55316 AL591471.1-201ENST00000621855 229 ntBASIC12.64□□□□□ -0.39
FOXG1P55316 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 MST1P2-201ENST00000457982 2291 ntBASIC12.64□□□□□ -0.39
FOXG1P55316 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXG1P55316 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.64□□□□□ -0.39
FOXG1P55316 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
FOXG1P55316 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
FOXG1P55316 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.64□□□□□ -0.39
FOXG1P55316 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
FOXG1P55316 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
FOXG1P55316 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
FOXG1P55316 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
FOXG1P55316 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.63□□□□□ -0.39
FOXG1P55316 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
FOXG1P55316 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.63□□□□□ -0.39
FOXG1P55316 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
FOXG1P55316 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms