Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 TUBB8P4-201ENST00000511806 1324 ntBASIC14.74□□□□□ -0.05
CDH4P55283 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH4P55283 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.74□□□□□ -0.05
CDH4P55283 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH4P55283 ELK2AP-201ENST00000392510 1007 ntBASIC14.74□□□□□ -0.05
CDH4P55283 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH4P55283 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH4P55283 PDIA3P2-201ENST00000428073 158 ntBASIC14.74□□□□□ -0.05
CDH4P55283 DUX4L50-201ENST00000455245 715 ntBASIC14.74□□□□□ -0.05
CDH4P55283 RN7SL277P-201ENST00000481521 288 ntBASIC14.74□□□□□ -0.05
CDH4P55283 NUP210P1-202ENST00000504322 710 ntBASIC14.74□□□□□ -0.05
CDH4P55283 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.74□□□□□ -0.05
CDH4P55283 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.74□□□□□ -0.05
CDH4P55283 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CDH4P55283 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.74□□□□□ -0.05
CDH4P55283 RN7SL574P-201ENST00000581512 297 ntBASIC14.74□□□□□ -0.05
CDH4P55283 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH4P55283 MIR6769A-201ENST00000617340 73 ntBASIC14.74□□□□□ -0.05
CDH4P55283 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CDH4P55283 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.74□□□□□ -0.05
CDH4P55283 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CDH4P55283 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDH4P55283 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH4P55283 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CDH4P55283 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH4P55283 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH4P55283 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 AC152010.1-201ENST00000415779 2006 ntBASIC14.73□□□□□ -0.05
CDH4P55283 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
CDH4P55283 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 AC015909.3-201ENST00000572855 1794 ntBASIC14.73□□□□□ -0.05
CDH4P55283 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CDH4P55283 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH4P55283 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CDH4P55283 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH4P55283 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 USP17L6P-201ENST00000382470 1197 ntBASIC14.73□□□□□ -0.05
CDH4P55283 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH4P55283 AC245884.6-201ENST00000515672 1067 ntBASIC14.73□□□□□ -0.05
CDH4P55283 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH4P55283 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH4P55283 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH4P55283 AC020922.3-201ENST00000595064 547 ntBASIC14.73□□□□□ -0.05
CDH4P55283 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH4P55283 MEG3_2.1-201ENST00000611456 105 ntBASIC14.73□□□□□ -0.05
CDH4P55283 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.73□□□□□ -0.05
CDH4P55283 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH4P55283 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH4P55283 AC139749.1-202ENST00000617529 3139 ntBASIC14.73□□□□□ -0.05
CDH4P55283 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH4P55283 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH4P55283 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CDH4P55283 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH4P55283 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDH4P55283 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH4P55283 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH4P55283 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CDH4P55283 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CDH4P55283 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
CDH4P55283 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH4P55283 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms