Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
ATXN3P54252 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ATXN3P54252 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ATXN3P54252 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.92□□□□□ -0.02
ATXN3P54252 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ATXN3P54252 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.91□□□□□ -0.02
ATXN3P54252 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
ATXN3P54252 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ATXN3P54252 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.91□□□□□ -0.02
ATXN3P54252 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ATXN3P54252 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.91□□□□□ -0.02
ATXN3P54252 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.91□□□□□ -0.02
ATXN3P54252 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.91□□□□□ -0.02
ATXN3P54252 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.91□□□□□ -0.02
ATXN3P54252 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ATXN3P54252 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ATXN3P54252 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ATXN3P54252 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ATXN3P54252 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 DPM3-202ENST00000368399 517 ntBASIC14.91□□□□□ -0.02
ATXN3P54252 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.91□□□□□ -0.02
ATXN3P54252 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 AC006335.1-201ENST00000445200 547 ntBASIC14.91□□□□□ -0.02
ATXN3P54252 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.91□□□□□ -0.02
ATXN3P54252 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 RN7SL574P-201ENST00000581512 297 ntBASIC14.91□□□□□ -0.02
ATXN3P54252 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.91□□□□□ -0.02
ATXN3P54252 MIR4750-201ENST00000584564 56 ntBASIC14.91□□□□□ -0.02
ATXN3P54252 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.91□□□□□ -0.02
ATXN3P54252 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.91□□□□□ -0.02
ATXN3P54252 AC004923.1-202ENST00000642106 209 ntBASIC14.91□□□□□ -0.02
ATXN3P54252 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.91□□□□□ -0.02
ATXN3P54252 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.91□□□□□ -0.02
ATXN3P54252 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ATXN3P54252 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ATXN3P54252 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ATXN3P54252 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ATXN3P54252 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.91□□□□□ -0.02
ATXN3P54252 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
ATXN3P54252 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
ATXN3P54252 AL157791.1-201ENST00000553667 1699 ntBASIC14.9□□□□□ -0.02
ATXN3P54252 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.9□□□□□ -0.02
ATXN3P54252 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ATXN3P54252 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.9□□□□□ -0.02
ATXN3P54252 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ATXN3P54252 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.9□□□□□ -0.02
ATXN3P54252 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ATXN3P54252 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.9□□□□□ -0.02
ATXN3P54252 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.9□□□□□ -0.02
ATXN3P54252 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.9□□□□□ -0.02
ATXN3P54252 ACTG1P2-201ENST00000415776 1125 ntBASIC14.9□□□□□ -0.02
ATXN3P54252 POM121L8P-201ENST00000417732 1281 ntBASIC14.9□□□□□ -0.02
ATXN3P54252 ACTG1P11-201ENST00000425411 1125 ntBASIC14.9□□□□□ -0.02
ATXN3P54252 POM121L9P-203ENST00000441984 1285 ntBASIC14.9□□□□□ -0.02
ATXN3P54252 AC234782.1-201ENST00000451950 919 ntBASIC14.9□□□□□ -0.02
ATXN3P54252 RN7SL818P-201ENST00000485099 259 ntBASIC14.9□□□□□ -0.02
ATXN3P54252 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.9□□□□□ -0.02
ATXN3P54252 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.9□□□□□ -0.02
ATXN3P54252 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms