Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 KRT8P14-201ENST00000414254 1442 ntBASIC12.27□□□□□ -0.45
NKX2-5P52952 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 AP005117.1-201ENST00000584346 1413 ntBASIC12.27□□□□□ -0.45
NKX2-5P52952 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
NKX2-5P52952 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-5P52952 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
NKX2-5P52952 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC12.27□□□□□ -0.45
NKX2-5P52952 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-5P52952 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
NKX2-5P52952 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-5P52952 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
NKX2-5P52952 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX2-5P52952 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
NKX2-5P52952 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-5P52952 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 LRRCC1-201ENST00000360375 3813 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX2-5P52952 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
NKX2-5P52952 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-5P52952 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-5P52952 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 YBX1P2-201ENST00000489612 999 ntBASIC12.26□□□□□ -0.45
NKX2-5P52952 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-5P52952 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.26□□□□□ -0.45
NKX2-5P52952 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.26□□□□□ -0.45
NKX2-5P52952 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX2-5P52952 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX2-5P52952 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
NKX2-5P52952 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX2-5P52952 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
NKX2-5P52952 CSPG4P13-202ENST00000567704 4801 ntBASIC12.26□□□□□ -0.45
NKX2-5P52952 ARMC1-202ENST00000458464 2849 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-5P52952 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 AC080013.1-204ENST00000607426 2185 ntBASIC12.26□□□□□ -0.45
NKX2-5P52952 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX2-5P52952 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 PRIMA1-202ENST00000393140 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 NSUN5P1-202ENST00000421140 1535 ntBASIC12.26□□□□□ -0.45
NKX2-5P52952 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 CAPN10-AS1-201ENST00000567819 4000 ntBASIC12.26□□□□□ -0.45
NKX2-5P52952 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NKX2-5P52952 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-5P52952 MAX-212ENST00000555932 1673 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX2-5P52952 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-5P52952 AC108024.1-201ENST00000626286 1721 ntBASIC12.25□□□□□ -0.45
NKX2-5P52952 IRAK2-201ENST00000256458 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.25□□□□□ -0.45
NKX2-5P52952 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX2-5P52952 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-5P52952 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX2-5P52952 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX2-5P52952 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX2-5P52952 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
NKX2-5P52952 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX2-5P52952 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.25□□□□□ -0.45
NKX2-5P52952 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.25□□□□□ -0.45
NKX2-5P52952 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.25□□□□□ -0.45
NKX2-5P52952 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-5P52952 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 KRT8P35-201ENST00000483942 1338 ntBASIC12.25□□□□□ -0.45
NKX2-5P52952 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX2-5P52952 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 AC233702.3-201ENST00000578656 1387 ntBASIC12.25□□□□□ -0.45
NKX2-5P52952 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX2-5P52952 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
NKX2-5P52952 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.25□□□□□ -0.45
NKX2-5P52952 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-5P52952 ALK-205ENST00000618119 4646 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-5P52952 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-5P52952 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-5P52952 AC009549.1-201ENST00000603468 1686 ntBASIC12.25□□□□□ -0.45
NKX2-5P52952 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms