Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLCN4P51793 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CLCN4P51793 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.11■□□□□ 0.01
CLCN4P51793 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.1■□□□□ 0.01
CLCN4P51793 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.1■□□□□ 0.01
CLCN4P51793 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLCN4P51793 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.1■□□□□ 0.01
CLCN4P51793 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.1■□□□□ 0.01
CLCN4P51793 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
CLCN4P51793 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CLCN4P51793 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.1■□□□□ 0.01
CLCN4P51793 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLCN4P51793 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.1■□□□□ 0.01
CLCN4P51793 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.1■□□□□ 0.01
CLCN4P51793 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.1■□□□□ 0.01
CLCN4P51793 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.1■□□□□ 0.01
CLCN4P51793 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 MIR4472-1-201ENST00000584349 80 ntBASIC15.1■□□□□ 0.01
CLCN4P51793 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.1■□□□□ 0.01
CLCN4P51793 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.1■□□□□ 0.01
CLCN4P51793 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CLCN4P51793 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.1■□□□□ 0.01
CLCN4P51793 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.1■□□□□ 0.01
CLCN4P51793 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
CLCN4P51793 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLCN4P51793 FAM45BP-202ENST00000592932 1624 ntBASIC15.1■□□□□ 0.01
CLCN4P51793 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCN4P51793 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCN4P51793 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.09■□□□□ 0.01
CLCN4P51793 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCN4P51793 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLCN4P51793 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLCN4P51793 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLCN4P51793 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.09■□□□□ 0.01
CLCN4P51793 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCN4P51793 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
CLCN4P51793 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCN4P51793 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCN4P51793 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCN4P51793 GCSHP3-201ENST00000431120 391 ntBASIC15.09■□□□□ 0.01
CLCN4P51793 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.09■□□□□ 0.01
CLCN4P51793 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.09■□□□□ 0.01
CLCN4P51793 SCARNA12-201ENST00000459155 270 ntBASIC15.09■□□□□ 0.01
CLCN4P51793 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLCN4P51793 AC010234.1-201ENST00000494599 870 ntBASIC15.09■□□□□ 0.01
CLCN4P51793 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCN4P51793 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 SORD2P-201ENST00000558556 1069 ntBASIC15.09■□□□□ 0.01
CLCN4P51793 NDUFB10P1-201ENST00000567319 521 ntBASIC15.09■□□□□ 0.01
CLCN4P51793 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms