Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HLCSP50747 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 POM121L8P-201ENST00000417732 1281 ntBASIC13.92□□□□□ -0.18
HLCSP50747 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.92□□□□□ -0.18
HLCSP50747 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HLCSP50747 FAM8A4P-201ENST00000435433 1213 ntBASIC13.92□□□□□ -0.18
HLCSP50747 POM121L9P-203ENST00000441984 1285 ntBASIC13.92□□□□□ -0.18
HLCSP50747 Z93015.1-201ENST00000451718 390 ntBASIC13.92□□□□□ -0.18
HLCSP50747 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.92□□□□□ -0.18
HLCSP50747 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.92□□□□□ -0.18
HLCSP50747 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
HLCSP50747 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.92□□□□□ -0.18
HLCSP50747 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.92□□□□□ -0.18
HLCSP50747 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.92□□□□□ -0.18
HLCSP50747 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
HLCSP50747 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.92□□□□□ -0.18
HLCSP50747 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HLCSP50747 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
HLCSP50747 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.92□□□□□ -0.18
HLCSP50747 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLCSP50747 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HLCSP50747 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HLCSP50747 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.91□□□□□ -0.18
HLCSP50747 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
HLCSP50747 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 AGGF1P1-201ENST00000509500 2073 ntBASIC13.91□□□□□ -0.18
HLCSP50747 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.91□□□□□ -0.18
HLCSP50747 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.91□□□□□ -0.18
HLCSP50747 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.91□□□□□ -0.18
HLCSP50747 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HLCSP50747 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 HOMER2P2-201ENST00000451621 847 ntBASIC13.91□□□□□ -0.18
HLCSP50747 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.91□□□□□ -0.18
HLCSP50747 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.91□□□□□ -0.18
HLCSP50747 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.91□□□□□ -0.18
HLCSP50747 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
HLCSP50747 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.91□□□□□ -0.18
HLCSP50747 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
HLCSP50747 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.91□□□□□ -0.18
HLCSP50747 MIR6869-201ENST00000619434 62 ntBASIC13.91□□□□□ -0.18
HLCSP50747 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
HLCSP50747 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.91□□□□□ -0.18
HLCSP50747 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
HLCSP50747 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HLCSP50747 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.91□□□□□ -0.18
HLCSP50747 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 BEND3P3-201ENST00000611030 2440 ntBASIC13.91□□□□□ -0.18
HLCSP50747 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HLCSP50747 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.91□□□□□ -0.18
HLCSP50747 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLCSP50747 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLCSP50747 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLCSP50747 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HLCSP50747 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms