Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.26□□□□□ -0.29
CENPAP49450 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CENPAP49450 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CENPAP49450 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.26□□□□□ -0.29
CENPAP49450 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.26□□□□□ -0.29
CENPAP49450 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CENPAP49450 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CENPAP49450 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.26□□□□□ -0.29
CENPAP49450 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.26□□□□□ -0.29
CENPAP49450 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC13.26□□□□□ -0.29
CENPAP49450 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CENPAP49450 AC093433.1-201ENST00000458048 571 ntBASIC13.26□□□□□ -0.29
CENPAP49450 MYADML-201ENST00000474610 2147 ntBASIC13.26□□□□□ -0.29
CENPAP49450 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CENPAP49450 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.26□□□□□ -0.29
CENPAP49450 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.26□□□□□ -0.29
CENPAP49450 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
CENPAP49450 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.26□□□□□ -0.29
CENPAP49450 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.26□□□□□ -0.29
CENPAP49450 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.26□□□□□ -0.29
CENPAP49450 AC015688.4-201ENST00000580780 1647 ntBASIC13.26□□□□□ -0.29
CENPAP49450 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.26□□□□□ -0.29
CENPAP49450 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CENPAP49450 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.26□□□□□ -0.29
CENPAP49450 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.26□□□□□ -0.29
CENPAP49450 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CENPAP49450 WFDC1-204ENST00000613603 549 ntBASIC13.26□□□□□ -0.29
CENPAP49450 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.26□□□□□ -0.29
CENPAP49450 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.26□□□□□ -0.29
CENPAP49450 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.26□□□□□ -0.29
CENPAP49450 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.26□□□□□ -0.29
CENPAP49450 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.25□□□□□ -0.29
CENPAP49450 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.25□□□□□ -0.29
CENPAP49450 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CENPAP49450 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 AC003102.2-201ENST00000589195 1469 ntBASIC13.25□□□□□ -0.29
CENPAP49450 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
CENPAP49450 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.25□□□□□ -0.29
CENPAP49450 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
CENPAP49450 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CENPAP49450 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CENPAP49450 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.25□□□□□ -0.29
CENPAP49450 FAM207CP-201ENST00000443486 507 ntBASIC13.25□□□□□ -0.29
CENPAP49450 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.25□□□□□ -0.29
CENPAP49450 API5-211ENST00000534695 560 ntTSL 5 BASIC13.25□□□□□ -0.29
CENPAP49450 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 AC009486.1-201ENST00000569860 813 ntBASIC13.25□□□□□ -0.29
CENPAP49450 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.25□□□□□ -0.29
CENPAP49450 AC140912.1-201ENST00000577171 1054 ntBASIC13.25□□□□□ -0.29
CENPAP49450 CLUHP6-201ENST00000580789 941 ntBASIC13.25□□□□□ -0.29
CENPAP49450 RN7SL204P-201ENST00000582831 262 ntBASIC13.25□□□□□ -0.29
CENPAP49450 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.25□□□□□ -0.29
CENPAP49450 AL033527.5-201ENST00000641382 801 ntBASIC13.25□□□□□ -0.29
CENPAP49450 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.25□□□□□ -0.29
CENPAP49450 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.25□□□□□ -0.29
CENPAP49450 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.25□□□□□ -0.29
CENPAP49450 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CENPAP49450 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CENPAP49450 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.25□□□□□ -0.29
CENPAP49450 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CENPAP49450 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms