Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CDC34P49427 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 AC011481.3-201ENST00000623895 5594 ntBASIC11.51□□□□□ -0.57
CDC34P49427 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CDC34P49427 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.51□□□□□ -0.57
CDC34P49427 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CDC34P49427 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 AL391647.1-201ENST00000395664 511 ntBASIC11.51□□□□□ -0.57
CDC34P49427 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC34P49427 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CDC34P49427 AL627223.1-201ENST00000416693 442 ntBASIC11.51□□□□□ -0.57
CDC34P49427 SDHAP3-202ENST00000515467 728 ntBASIC11.51□□□□□ -0.57
CDC34P49427 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CDC34P49427 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.51□□□□□ -0.57
CDC34P49427 AL512361.1-201ENST00000554200 418 ntBASIC11.51□□□□□ -0.57
CDC34P49427 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.51□□□□□ -0.57
CDC34P49427 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.51□□□□□ -0.57
CDC34P49427 DUX4L47-201ENST00000566374 394 ntBASIC11.51□□□□□ -0.57
CDC34P49427 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11.51□□□□□ -0.57
CDC34P49427 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CDC34P49427 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 IL9RP2-201ENST00000423948 1312 ntBASIC11.51□□□□□ -0.57
CDC34P49427 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC34P49427 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CDC34P49427 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
CDC34P49427 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CDC34P49427 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CDC34P49427 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC34P49427 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.51□□□□□ -0.57
CDC34P49427 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CDC34P49427 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 AC009474.1-201ENST00000455096 1565 ntBASIC11.5□□□□□ -0.57
CDC34P49427 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.5□□□□□ -0.57
CDC34P49427 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CDC34P49427 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CDC34P49427 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CDC34P49427 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CDC34P49427 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 RPL37AP1-201ENST00000412502 279 ntBASIC11.5□□□□□ -0.57
CDC34P49427 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 SPDYE7P-202ENST00000420373 878 ntBASIC11.5□□□□□ -0.57
CDC34P49427 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.5□□□□□ -0.57
CDC34P49427 GPS2P2-201ENST00000430745 888 ntBASIC11.5□□□□□ -0.57
CDC34P49427 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.5□□□□□ -0.57
CDC34P49427 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC11.5□□□□□ -0.57
CDC34P49427 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC11.5□□□□□ -0.57
CDC34P49427 TIMM17BP1-201ENST00000545713 516 ntBASIC11.5□□□□□ -0.57
CDC34P49427 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.5□□□□□ -0.57
CDC34P49427 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.5□□□□□ -0.57
CDC34P49427 SORD2P-201ENST00000558556 1069 ntBASIC11.5□□□□□ -0.57
CDC34P49427 AC051619.7-201ENST00000568314 623 ntBASIC11.5□□□□□ -0.57
CDC34P49427 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.5□□□□□ -0.57
CDC34P49427 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CDC34P49427 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms