Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL591163.1-201ENST00000641757 987 ntBASIC12.79□□□□□ -0.36
CX3CR1P49238 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.79□□□□□ -0.36
CX3CR1P49238 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.79□□□□□ -0.36
CX3CR1P49238 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 AC092053.3-201ENST00000641308 4975 ntBASIC12.79□□□□□ -0.36
CX3CR1P49238 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.79□□□□□ -0.36
CX3CR1P49238 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.79□□□□□ -0.36
CX3CR1P49238 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CX3CR1P49238 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CX3CR1P49238 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.79□□□□□ -0.36
CX3CR1P49238 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.79□□□□□ -0.36
CX3CR1P49238 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CX3CR1P49238 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.78□□□□□ -0.36
CX3CR1P49238 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CX3CR1P49238 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CX3CR1P49238 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.78□□□□□ -0.36
CX3CR1P49238 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 DGCR9-201ENST00000609630 2415 ntBASIC12.78□□□□□ -0.36
CX3CR1P49238 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CX3CR1P49238 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 CD8B2-202ENST00000417670 633 ntBASIC12.78□□□□□ -0.36
CX3CR1P49238 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.78□□□□□ -0.36
CX3CR1P49238 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.78□□□□□ -0.36
CX3CR1P49238 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.78□□□□□ -0.36
CX3CR1P49238 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.78□□□□□ -0.36
CX3CR1P49238 COX5BP1-201ENST00000507622 393 ntBASIC12.78□□□□□ -0.36
CX3CR1P49238 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.78□□□□□ -0.36
CX3CR1P49238 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.78□□□□□ -0.36
CX3CR1P49238 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CX3CR1P49238 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.78□□□□□ -0.36
CX3CR1P49238 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 AC078819.1-201ENST00000547454 765 ntBASIC12.78□□□□□ -0.36
CX3CR1P49238 AC012085.1-201ENST00000548270 765 ntBASIC12.78□□□□□ -0.36
CX3CR1P49238 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.78□□□□□ -0.36
CX3CR1P49238 RN7SL713P-201ENST00000582127 302 ntBASIC12.78□□□□□ -0.36
CX3CR1P49238 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.78□□□□□ -0.36
CX3CR1P49238 BTNL10-201ENST00000595971 695 ntBASIC12.78□□□□□ -0.36
CX3CR1P49238 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.78□□□□□ -0.36
CX3CR1P49238 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 AL358472.5-202ENST00000641448 1267 ntBASIC12.78□□□□□ -0.36
CX3CR1P49238 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
CX3CR1P49238 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 AC009093.10-201ENST00000641956 1442 ntBASIC12.78□□□□□ -0.36
CX3CR1P49238 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.78□□□□□ -0.36
CX3CR1P49238 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CX3CR1P49238 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CR1P49238 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CR1P49238 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
CX3CR1P49238 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CR1P49238 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CR1P49238 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CX3CR1P49238 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
CX3CR1P49238 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CR1P49238 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CX3CR1P49238 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CX3CR1P49238 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 207.5 ms