Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
TNNI2P48788 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TNNI2P48788 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.09■□□□□ 0.33
TNNI2P48788 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TNNI2P48788 AC018529.2-202ENST00000611482 3087 ntBASIC17.09■□□□□ 0.33
TNNI2P48788 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TNNI2P48788 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TNNI2P48788 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.09■□□□□ 0.33
TNNI2P48788 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 AL357563.1-201ENST00000404728 395 ntBASIC17.09■□□□□ 0.33
TNNI2P48788 BCAS2P2-201ENST00000425064 674 ntBASIC17.09■□□□□ 0.33
TNNI2P48788 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.09■□□□□ 0.33
TNNI2P48788 KRT18P66-201ENST00000452970 1269 ntBASIC17.09■□□□□ 0.33
TNNI2P48788 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.09■□□□□ 0.33
TNNI2P48788 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.09■□□□□ 0.33
TNNI2P48788 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.09■□□□□ 0.33
TNNI2P48788 MIR4472-1-201ENST00000584349 80 ntBASIC17.09■□□□□ 0.33
TNNI2P48788 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
TNNI2P48788 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.09■□□□□ 0.33
TNNI2P48788 AC007250.1-201ENST00000608934 338 ntBASIC17.09■□□□□ 0.33
TNNI2P48788 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.09■□□□□ 0.33
TNNI2P48788 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNNI2P48788 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
TNNI2P48788 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNNI2P48788 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
TNNI2P48788 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TNNI2P48788 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNNI2P48788 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNNI2P48788 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TNNI2P48788 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TNNI2P48788 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TNNI2P48788 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNNI2P48788 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.08■□□□□ 0.32
TNNI2P48788 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.08■□□□□ 0.32
TNNI2P48788 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNNI2P48788 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNNI2P48788 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.08■□□□□ 0.32
TNNI2P48788 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.08■□□□□ 0.32
TNNI2P48788 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNNI2P48788 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.08■□□□□ 0.32
TNNI2P48788 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.08■□□□□ 0.32
TNNI2P48788 REEP5-205ENST00000504247 480 ntTSL 5 BASIC17.08■□□□□ 0.32
TNNI2P48788 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC17.08■□□□□ 0.32
TNNI2P48788 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.08■□□□□ 0.32
TNNI2P48788 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TNNI2P48788 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC17.08■□□□□ 0.32
TNNI2P48788 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC17.08■□□□□ 0.32
TNNI2P48788 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
TNNI2P48788 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNNI2P48788 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNNI2P48788 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNNI2P48788 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNNI2P48788 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNNI2P48788 FGD5P1-202ENST00000614866 2498 ntBASIC17.08■□□□□ 0.32
TNNI2P48788 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNNI2P48788 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.08■□□□□ 0.32
TNNI2P48788 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNNI2P48788 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.08■□□□□ 0.32
TNNI2P48788 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNNI2P48788 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNNI2P48788 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNNI2P48788 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNNI2P48788 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.07■□□□□ 0.32
TNNI2P48788 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNNI2P48788 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TNNI2P48788 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.07■□□□□ 0.32
TNNI2P48788 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TNNI2P48788 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms