Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CSNK1DP48730 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1DP48730 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1DP48730 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CSNK1DP48730 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CSNK1DP48730 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
CSNK1DP48730 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1DP48730 OR2I1P-209ENST00000641730 5365 ntBASIC14.41□□□□□ -0.1
CSNK1DP48730 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1DP48730 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1DP48730 KRT17P5-201ENST00000332088 839 ntBASIC14.41□□□□□ -0.1
CSNK1DP48730 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1DP48730 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.41□□□□□ -0.1
CSNK1DP48730 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.41□□□□□ -0.1
CSNK1DP48730 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.41□□□□□ -0.1
CSNK1DP48730 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1DP48730 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1DP48730 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.41□□□□□ -0.1
CSNK1DP48730 CHCHD2P2-201ENST00000503744 321 ntBASIC14.41□□□□□ -0.1
CSNK1DP48730 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1DP48730 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1DP48730 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1DP48730 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1DP48730 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1DP48730 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.41□□□□□ -0.1
CSNK1DP48730 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.41□□□□□ -0.1
CSNK1DP48730 AL109837.1-201ENST00000603272 613 ntBASIC14.41□□□□□ -0.1
CSNK1DP48730 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1DP48730 FAM90A2P-201ENST00000511144 1395 ntBASIC14.41□□□□□ -0.1
CSNK1DP48730 FAM90A25P-201ENST00000528404 1395 ntBASIC14.41□□□□□ -0.1
CSNK1DP48730 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1DP48730 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CSNK1DP48730 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1DP48730 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1DP48730 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1DP48730 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1DP48730 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1DP48730 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1DP48730 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.41□□□□□ -0.1
CSNK1DP48730 KRT18P9-201ENST00000604826 1300 ntBASIC14.41□□□□□ -0.1
CSNK1DP48730 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CSNK1DP48730 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1DP48730 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.4□□□□□ -0.1
CSNK1DP48730 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1DP48730 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CSNK1DP48730 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1DP48730 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CSNK1DP48730 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1DP48730 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 OR8T1P-201ENST00000421347 918 ntBASIC14.4□□□□□ -0.1
CSNK1DP48730 AC007274.2-201ENST00000421675 662 ntBASIC14.4□□□□□ -0.1
CSNK1DP48730 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.4□□□□□ -0.1
CSNK1DP48730 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1DP48730 RN7SL720P-201ENST00000488178 304 ntBASIC14.4□□□□□ -0.1
CSNK1DP48730 RTN3P1-201ENST00000536295 711 ntBASIC14.4□□□□□ -0.1
CSNK1DP48730 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1DP48730 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CSNK1DP48730 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
CSNK1DP48730 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1DP48730 BAP1-211ENST00000615113 489 ntBASIC14.4□□□□□ -0.1
CSNK1DP48730 AC079336.7-201ENST00000623428 1078 ntBASIC14.4□□□□□ -0.1
CSNK1DP48730 AC006453.1-201ENST00000636037 1257 ntBASIC14.4□□□□□ -0.1
CSNK1DP48730 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CSNK1DP48730 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.4□□□□□ -0.1
CSNK1DP48730 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1DP48730 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
CSNK1DP48730 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CSNK1DP48730 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1DP48730 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1DP48730 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1DP48730 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.39□□□□□ -0.11
CSNK1DP48730 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1DP48730 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1DP48730 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms