Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.89■□□□□ 0.13
USP8P40818 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 MYADML-201ENST00000474610 2147 ntBASIC15.89■□□□□ 0.13
USP8P40818 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
USP8P40818 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
USP8P40818 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
USP8P40818 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.89■□□□□ 0.13
USP8P40818 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
USP8P40818 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.89■□□□□ 0.13
USP8P40818 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
USP8P40818 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.89■□□□□ 0.13
USP8P40818 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.89■□□□□ 0.13
USP8P40818 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.89■□□□□ 0.13
USP8P40818 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.89■□□□□ 0.13
USP8P40818 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.89■□□□□ 0.13
USP8P40818 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.89■□□□□ 0.13
USP8P40818 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.89■□□□□ 0.13
USP8P40818 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.89■□□□□ 0.13
USP8P40818 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.89■□□□□ 0.13
USP8P40818 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.89■□□□□ 0.13
USP8P40818 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.89■□□□□ 0.13
USP8P40818 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.89■□□□□ 0.13
USP8P40818 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 AC138951.2-201ENST00000623455 1161 ntBASIC15.89■□□□□ 0.13
USP8P40818 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.89■□□□□ 0.13
USP8P40818 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
USP8P40818 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.89■□□□□ 0.13
USP8P40818 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
USP8P40818 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.89■□□□□ 0.13
USP8P40818 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.89■□□□□ 0.13
USP8P40818 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
USP8P40818 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.89■□□□□ 0.13
USP8P40818 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
USP8P40818 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.88■□□□□ 0.13
USP8P40818 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.88■□□□□ 0.13
USP8P40818 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
USP8P40818 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
USP8P40818 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
USP8P40818 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.88■□□□□ 0.13
USP8P40818 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
USP8P40818 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
USP8P40818 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
USP8P40818 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.88■□□□□ 0.13
USP8P40818 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
USP8P40818 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
USP8P40818 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 KRT43P-201ENST00000434019 910 ntBASIC15.88■□□□□ 0.13
USP8P40818 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
USP8P40818 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.88■□□□□ 0.13
USP8P40818 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 AC078819.1-201ENST00000547454 765 ntBASIC15.88■□□□□ 0.13
USP8P40818 AC012085.1-201ENST00000548270 765 ntBASIC15.88■□□□□ 0.13
USP8P40818 AC106820.3-201ENST00000561653 397 ntBASIC15.88■□□□□ 0.13
USP8P40818 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.88■□□□□ 0.13
USP8P40818 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.88■□□□□ 0.13
USP8P40818 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
USP8P40818 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.88■□□□□ 0.13
USP8P40818 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC15.88■□□□□ 0.13
USP8P40818 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
USP8P40818 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.88■□□□□ 0.13
USP8P40818 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
USP8P40818 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.88■□□□□ 0.13
USP8P40818 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
USP8P40818 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.88■□□□□ 0.13
USP8P40818 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.88■□□□□ 0.13
USP8P40818 CES1P1-201ENST00000421606 1704 ntBASIC15.88■□□□□ 0.13
USP8P40818 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms