Protein–RNA interactions for Protein: P40227

CCT6A, T-complex protein 1 subunit zeta, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6AP40227 AC091271.1-201ENST00000611877 1162 ntBASIC16.41■□□□□ 0.22
CCT6AP40227 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCT6AP40227 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.41■□□□□ 0.22
CCT6AP40227 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CCT6AP40227 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.41■□□□□ 0.22
CCT6AP40227 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCT6AP40227 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCT6AP40227 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCT6AP40227 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCT6AP40227 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCT6AP40227 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.41■□□□□ 0.22
CCT6AP40227 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCT6AP40227 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCT6AP40227 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCT6AP40227 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CCT6AP40227 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCT6AP40227 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.41■□□□□ 0.22
CCT6AP40227 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCT6AP40227 AC089987.1-201ENST00000551654 2209 ntBASIC16.41■□□□□ 0.22
CCT6AP40227 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCT6AP40227 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCT6AP40227 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCT6AP40227 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCT6AP40227 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.4■□□□□ 0.22
CCT6AP40227 REXO1L6P-201ENST00000603433 1515 ntBASIC16.4■□□□□ 0.22
CCT6AP40227 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.4■□□□□ 0.22
CCT6AP40227 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.4■□□□□ 0.22
CCT6AP40227 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.4■□□□□ 0.22
CCT6AP40227 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.4■□□□□ 0.22
CCT6AP40227 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.4■□□□□ 0.22
CCT6AP40227 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.4■□□□□ 0.22
CCT6AP40227 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.4■□□□□ 0.22
CCT6AP40227 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCT6AP40227 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCT6AP40227 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.4■□□□□ 0.22
CCT6AP40227 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 BRWD1P1-201ENST00000401091 371 ntBASIC16.4■□□□□ 0.22
CCT6AP40227 MIR663B-201ENST00000408361 115 ntBASIC16.4■□□□□ 0.22
CCT6AP40227 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.4■□□□□ 0.22
CCT6AP40227 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.4■□□□□ 0.22
CCT6AP40227 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.4■□□□□ 0.22
CCT6AP40227 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.4■□□□□ 0.22
CCT6AP40227 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.4■□□□□ 0.22
CCT6AP40227 AL591846.1-201ENST00000451736 433 ntBASIC16.4■□□□□ 0.22
CCT6AP40227 AC021723.1-201ENST00000486306 515 ntBASIC16.4■□□□□ 0.22
CCT6AP40227 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.4■□□□□ 0.22
CCT6AP40227 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.4■□□□□ 0.22
CCT6AP40227 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.4■□□□□ 0.22
CCT6AP40227 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.4■□□□□ 0.22
CCT6AP40227 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 AC104982.3-201ENST00000581995 514 ntBASIC16.4■□□□□ 0.22
CCT6AP40227 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCT6AP40227 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.4■□□□□ 0.22
CCT6AP40227 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.4■□□□□ 0.22
CCT6AP40227 Z98259.2-201ENST00000641583 609 ntBASIC16.4■□□□□ 0.22
CCT6AP40227 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.4■□□□□ 0.22
CCT6AP40227 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.4■□□□□ 0.22
CCT6AP40227 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 AL008718.2-201ENST00000609206 1313 ntBASIC16.4■□□□□ 0.22
CCT6AP40227 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCT6AP40227 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCT6AP40227 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.4■□□□□ 0.22
CCT6AP40227 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CCT6AP40227 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CCT6AP40227 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCT6AP40227 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCT6AP40227 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCT6AP40227 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCT6AP40227 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CCT6AP40227 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.39■□□□□ 0.21
CCT6AP40227 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CCT6AP40227 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.39■□□□□ 0.21
CCT6AP40227 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCT6AP40227 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CCT6AP40227 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CCT6AP40227 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCT6AP40227 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
CCT6AP40227 FAM58BP-201ENST00000439056 645 ntBASIC16.39■□□□□ 0.21
CCT6AP40227 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.39■□□□□ 0.21
CCT6AP40227 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.39■□□□□ 0.21
CCT6AP40227 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.39■□□□□ 0.21
CCT6AP40227 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCT6AP40227 AC005962.1-201ENST00000584100 773 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms