Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM23P36406 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.21□□□□□ -0.14
TRIM23P36406 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
TRIM23P36406 AC005089.1-201ENST00000619486 2241 ntBASIC14.21□□□□□ -0.14
TRIM23P36406 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TRIM23P36406 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM23P36406 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM23P36406 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 AC007191.1-201ENST00000623179 2995 ntBASIC14.2□□□□□ -0.14
TRIM23P36406 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM23P36406 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRIM23P36406 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRIM23P36406 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM23P36406 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM23P36406 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRIM23P36406 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRIM23P36406 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRIM23P36406 MIR557-201ENST00000385239 98 ntBASIC14.2□□□□□ -0.14
TRIM23P36406 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
TRIM23P36406 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM23P36406 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.2□□□□□ -0.14
TRIM23P36406 DUTP3-201ENST00000450025 415 ntBASIC14.2□□□□□ -0.14
TRIM23P36406 RN7SL277P-201ENST00000481521 288 ntBASIC14.2□□□□□ -0.14
TRIM23P36406 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.2□□□□□ -0.14
TRIM23P36406 PRKXP1-201ENST00000561423 1122 ntBASIC14.2□□□□□ -0.14
TRIM23P36406 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.2□□□□□ -0.14
TRIM23P36406 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 AC009560.1-201ENST00000620208 434 ntBASIC14.2□□□□□ -0.14
TRIM23P36406 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
TRIM23P36406 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM23P36406 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRIM23P36406 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM23P36406 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM23P36406 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
TRIM23P36406 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM23P36406 CCT8L1P-201ENST00000465400 1674 ntBASIC14.2□□□□□ -0.14
TRIM23P36406 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRIM23P36406 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM23P36406 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM23P36406 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.19□□□□□ -0.14
TRIM23P36406 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRIM23P36406 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.19□□□□□ -0.14
TRIM23P36406 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM23P36406 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRIM23P36406 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.19□□□□□ -0.14
TRIM23P36406 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRIM23P36406 AL627231.1-201ENST00000394467 1125 ntBASIC14.19□□□□□ -0.14
TRIM23P36406 AC026316.1-201ENST00000398900 414 ntBASIC14.19□□□□□ -0.14
TRIM23P36406 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM23P36406 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 AC019193.1-201ENST00000506678 823 ntBASIC14.19□□□□□ -0.14
TRIM23P36406 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.19□□□□□ -0.14
TRIM23P36406 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.19□□□□□ -0.14
TRIM23P36406 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.19□□□□□ -0.14
TRIM23P36406 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.19□□□□□ -0.14
TRIM23P36406 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.19□□□□□ -0.14
TRIM23P36406 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRIM23P36406 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.19□□□□□ -0.14
TRIM23P36406 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRIM23P36406 SIGLEC18P-201ENST00000602271 909 ntBASIC14.19□□□□□ -0.14
TRIM23P36406 AC103691.2-201ENST00000618824 433 ntBASIC14.19□□□□□ -0.14
TRIM23P36406 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRIM23P36406 AC051619.9-201ENST00000623237 597 ntBASIC14.19□□□□□ -0.14
TRIM23P36406 AL353726.2-201ENST00000623259 884 ntBASIC14.19□□□□□ -0.14
TRIM23P36406 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRIM23P36406 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 BRD7P5-201ENST00000299197 1822 ntBASIC14.19□□□□□ -0.14
TRIM23P36406 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRIM23P36406 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM23P36406 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRIM23P36406 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM23P36406 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM23P36406 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRIM23P36406 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms