Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
KRT9P35527 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT9P35527 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT9P35527 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT9P35527 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT9P35527 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT9P35527 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT9P35527 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT9P35527 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT9P35527 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT9P35527 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
KRT9P35527 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT9P35527 AC027612.1-201ENST00000445234 2395 ntBASIC15.9■□□□□ 0.14
KRT9P35527 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
KRT9P35527 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 AC020658.7-201ENST00000624274 2442 ntBASIC15.89■□□□□ 0.13
KRT9P35527 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
KRT9P35527 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT9P35527 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
KRT9P35527 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 NME2P1-201ENST00000426182 414 ntBASIC15.89■□□□□ 0.13
KRT9P35527 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.89■□□□□ 0.13
KRT9P35527 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.89■□□□□ 0.13
KRT9P35527 FTLP10-202ENST00000505798 471 ntBASIC15.89■□□□□ 0.13
KRT9P35527 USP32P1-208ENST00000506594 1164 ntBASIC15.89■□□□□ 0.13
KRT9P35527 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
KRT9P35527 AC025279.2-201ENST00000569730 653 ntBASIC15.89■□□□□ 0.13
KRT9P35527 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.89■□□□□ 0.13
KRT9P35527 BTNL10-201ENST00000595971 695 ntBASIC15.89■□□□□ 0.13
KRT9P35527 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 AC138466.3-201ENST00000619983 221 ntBASIC15.89■□□□□ 0.13
KRT9P35527 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.89■□□□□ 0.13
KRT9P35527 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.89■□□□□ 0.13
KRT9P35527 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT9P35527 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
KRT9P35527 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
KRT9P35527 AL359183.1-201ENST00000623796 2132 ntBASIC15.89■□□□□ 0.13
KRT9P35527 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
KRT9P35527 FKBP4P6-201ENST00000457486 1332 ntBASIC15.89■□□□□ 0.13
KRT9P35527 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.89■□□□□ 0.13
KRT9P35527 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT9P35527 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT9P35527 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT9P35527 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
KRT9P35527 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
KRT9P35527 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.88■□□□□ 0.13
KRT9P35527 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT9P35527 COX5BP8-201ENST00000416911 349 ntBASIC15.88■□□□□ 0.13
KRT9P35527 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 KRT17P7-201ENST00000451704 1104 ntBASIC15.88■□□□□ 0.13
KRT9P35527 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.88■□□□□ 0.13
KRT9P35527 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.88■□□□□ 0.13
KRT9P35527 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.88■□□□□ 0.13
KRT9P35527 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT9P35527 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
KRT9P35527 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT9P35527 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT9P35527 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT9P35527 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT9P35527 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
KRT9P35527 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT9P35527 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT9P35527 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT9P35527 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms