Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.7□□□□□ -0.7
CKS2P33552 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 AC009474.1-201ENST00000455096 1565 ntBASIC10.7□□□□□ -0.7
CKS2P33552 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
CKS2P33552 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 MKRN5P-201ENST00000445263 1467 ntBASIC10.7□□□□□ -0.7
CKS2P33552 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 AC093525.8-201ENST00000624099 1342 ntBASIC10.7□□□□□ -0.7
CKS2P33552 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 AC004870.1-201ENST00000315132 882 ntBASIC10.7□□□□□ -0.7
CKS2P33552 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 AC007969.1-201ENST00000433675 447 ntBASIC10.7□□□□□ -0.7
CKS2P33552 AC005237.2-201ENST00000434368 219 ntBASIC10.7□□□□□ -0.7
CKS2P33552 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.7□□□□□ -0.7
CKS2P33552 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.7□□□□□ -0.7
CKS2P33552 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 TSFM-210ENST00000550559 897 ntTSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.7□□□□□ -0.7
CKS2P33552 AL445228.2-201ENST00000605589 952 ntBASIC10.7□□□□□ -0.7
CKS2P33552 CITED2-204ENST00000618718 901 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS2P33552 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CKS2P33552 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC10.7□□□□□ -0.7
CKS2P33552 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS2P33552 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC10.69□□□□□ -0.7
CKS2P33552 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 AC024075.2-201ENST00000598112 1473 ntBASIC10.69□□□□□ -0.7
CKS2P33552 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CKS2P33552 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CKS2P33552 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 CETN4P-206ENST00000642099 2168 ntBASIC10.69□□□□□ -0.7
CKS2P33552 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
CKS2P33552 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS2P33552 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS2P33552 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS2P33552 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
CKS2P33552 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms