Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.34□□□□□ -0.27
SHC1P29353 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.34□□□□□ -0.27
SHC1P29353 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.34□□□□□ -0.27
SHC1P29353 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.34□□□□□ -0.27
SHC1P29353 RN7SL560P-201ENST00000577943 264 ntBASIC13.34□□□□□ -0.27
SHC1P29353 MIR4783-201ENST00000580343 82 ntBASIC13.34□□□□□ -0.27
SHC1P29353 EEF1DP1-201ENST00000585891 896 ntBASIC13.34□□□□□ -0.27
SHC1P29353 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.34□□□□□ -0.27
SHC1P29353 BX088702.1-201ENST00000610784 235 ntBASIC13.34□□□□□ -0.27
SHC1P29353 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SHC1P29353 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 AC099521.3-201ENST00000624251 2938 ntBASIC13.34□□□□□ -0.27
SHC1P29353 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.34□□□□□ -0.27
SHC1P29353 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.34□□□□□ -0.27
SHC1P29353 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.34□□□□□ -0.27
SHC1P29353 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.34□□□□□ -0.27
SHC1P29353 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.34□□□□□ -0.27
SHC1P29353 REXO1L6P-201ENST00000603433 1515 ntBASIC13.34□□□□□ -0.27
SHC1P29353 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHC1P29353 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.33□□□□□ -0.27
SHC1P29353 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
SHC1P29353 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
SHC1P29353 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
SHC1P29353 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SHC1P29353 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
SHC1P29353 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SHC1P29353 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SHC1P29353 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.33□□□□□ -0.27
SHC1P29353 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SHC1P29353 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
SHC1P29353 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SHC1P29353 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SHC1P29353 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.33□□□□□ -0.28
SHC1P29353 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.33□□□□□ -0.28
SHC1P29353 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.33□□□□□ -0.28
SHC1P29353 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SHC1P29353 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SHC1P29353 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SHC1P29353 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SHC1P29353 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.33□□□□□ -0.28
SHC1P29353 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.33□□□□□ -0.28
SHC1P29353 FAM86HP-204ENST00000513466 959 ntBASIC13.33□□□□□ -0.28
SHC1P29353 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.33□□□□□ -0.28
SHC1P29353 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.33□□□□□ -0.28
SHC1P29353 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.33□□□□□ -0.28
SHC1P29353 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SHC1P29353 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.33□□□□□ -0.28
SHC1P29353 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.33□□□□□ -0.28
SHC1P29353 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SHC1P29353 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 TCAF1P1-201ENST00000414990 2232 ntBASIC13.33□□□□□ -0.28
SHC1P29353 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
SHC1P29353 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.33□□□□□ -0.28
SHC1P29353 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.33□□□□□ -0.28
SHC1P29353 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.33□□□□□ -0.28
SHC1P29353 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.33□□□□□ -0.28
SHC1P29353 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.33□□□□□ -0.28
SHC1P29353 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.33□□□□□ -0.28
SHC1P29353 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHC1P29353 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SHC1P29353 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SHC1P29353 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.32□□□□□ -0.28
SHC1P29353 E2F3P2-201ENST00000447755 1422 ntBASIC13.32□□□□□ -0.28
SHC1P29353 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.32□□□□□ -0.28
SHC1P29353 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms