Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.14□□□□□ -0.15
EPHA3P29320 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.14□□□□□ -0.15
EPHA3P29320 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
EPHA3P29320 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
EPHA3P29320 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.14□□□□□ -0.15
EPHA3P29320 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
EPHA3P29320 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 FKBP4P6-201ENST00000457486 1332 ntBASIC14.14□□□□□ -0.15
EPHA3P29320 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
EPHA3P29320 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
EPHA3P29320 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
EPHA3P29320 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
EPHA3P29320 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
EPHA3P29320 AL118506.1-201ENST00000601296 3082 ntBASIC14.13□□□□□ -0.15
EPHA3P29320 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA3P29320 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 POM121L8P-201ENST00000417732 1281 ntBASIC14.13□□□□□ -0.15
EPHA3P29320 METTL21AP1-201ENST00000438852 635 ntBASIC14.13□□□□□ -0.15
EPHA3P29320 POM121L9P-203ENST00000441984 1285 ntBASIC14.13□□□□□ -0.15
EPHA3P29320 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA3P29320 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.13□□□□□ -0.15
EPHA3P29320 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.13□□□□□ -0.15
EPHA3P29320 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.13□□□□□ -0.15
EPHA3P29320 AC093512.1-201ENST00000617969 520 ntBASIC14.13□□□□□ -0.15
EPHA3P29320 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.13□□□□□ -0.15
EPHA3P29320 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
EPHA3P29320 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
EPHA3P29320 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
EPHA3P29320 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA3P29320 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.13□□□□□ -0.15
EPHA3P29320 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
EPHA3P29320 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.13□□□□□ -0.15
EPHA3P29320 PEG13-201ENST00000631594 5667 ntBASIC14.13□□□□□ -0.15
EPHA3P29320 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA3P29320 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
EPHA3P29320 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
EPHA3P29320 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA3P29320 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA3P29320 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA3P29320 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA3P29320 KRT8P28-201ENST00000433288 1390 ntBASIC14.12□□□□□ -0.15
EPHA3P29320 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA3P29320 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
EPHA3P29320 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA3P29320 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
EPHA3P29320 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA3P29320 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA3P29320 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA3P29320 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.12□□□□□ -0.15
EPHA3P29320 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.12□□□□□ -0.15
EPHA3P29320 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.12□□□□□ -0.15
EPHA3P29320 ARSEP1-201ENST00000420443 635 ntBASIC14.12□□□□□ -0.15
EPHA3P29320 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
EPHA3P29320 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.12□□□□□ -0.15
EPHA3P29320 AL161932.2-201ENST00000435436 679 ntBASIC14.12□□□□□ -0.15
EPHA3P29320 AL391280.1-201ENST00000506969 1062 ntBASIC14.12□□□□□ -0.15
EPHA3P29320 ALG3P1-201ENST00000508806 1114 ntBASIC14.12□□□□□ -0.15
EPHA3P29320 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.12□□□□□ -0.15
EPHA3P29320 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms