Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CHMLP26374 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHMLP26374 AC018629.1-201ENST00000623381 1736 ntBASIC17.38■□□□□ 0.37
CHMLP26374 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CHMLP26374 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHMLP26374 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CHMLP26374 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHMLP26374 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CHMLP26374 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CHMLP26374 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CHMLP26374 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CHMLP26374 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.38■□□□□ 0.37
CHMLP26374 AC092580.1-201ENST00000433998 658 ntBASIC17.38■□□□□ 0.37
CHMLP26374 XBP1P1-201ENST00000436573 652 ntBASIC17.38■□□□□ 0.37
CHMLP26374 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMLP26374 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.38■□□□□ 0.37
CHMLP26374 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.38■□□□□ 0.37
CHMLP26374 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.38■□□□□ 0.37
CHMLP26374 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMLP26374 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMLP26374 AC008805.1-201ENST00000590892 364 ntBASIC17.38■□□□□ 0.37
CHMLP26374 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.38■□□□□ 0.37
CHMLP26374 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC17.38■□□□□ 0.37
CHMLP26374 AL591471.1-201ENST00000621855 229 ntBASIC17.38■□□□□ 0.37
CHMLP26374 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.38■□□□□ 0.37
CHMLP26374 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHMLP26374 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMLP26374 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.38■□□□□ 0.37
CHMLP26374 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHMLP26374 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMLP26374 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.38■□□□□ 0.37
CHMLP26374 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC17.38■□□□□ 0.37
CHMLP26374 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC17.38■□□□□ 0.37
CHMLP26374 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
CHMLP26374 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMLP26374 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMLP26374 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMLP26374 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMLP26374 AP002353.1-201ENST00000528257 1599 ntBASIC17.37■□□□□ 0.37
CHMLP26374 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMLP26374 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC17.37■□□□□ 0.37
CHMLP26374 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHMLP26374 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHMLP26374 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMLP26374 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.37■□□□□ 0.37
CHMLP26374 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.37■□□□□ 0.37
CHMLP26374 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHMLP26374 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.37■□□□□ 0.37
CHMLP26374 BTBD6P1-201ENST00000412176 1267 ntBASIC17.37■□□□□ 0.37
CHMLP26374 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.37■□□□□ 0.37
CHMLP26374 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.37■□□□□ 0.37
CHMLP26374 ATP5G2P4-201ENST00000442175 420 ntBASIC17.37■□□□□ 0.37
CHMLP26374 AL591846.1-201ENST00000451736 433 ntBASIC17.37■□□□□ 0.37
CHMLP26374 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMLP26374 AC021723.1-201ENST00000486306 515 ntBASIC17.37■□□□□ 0.37
CHMLP26374 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.37■□□□□ 0.37
CHMLP26374 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.37■□□□□ 0.37
CHMLP26374 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.37■□□□□ 0.37
CHMLP26374 AL512310.5-201ENST00000551999 515 ntBASIC17.37■□□□□ 0.37
CHMLP26374 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.37■□□□□ 0.37
CHMLP26374 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.37■□□□□ 0.37
CHMLP26374 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.37■□□□□ 0.37
CHMLP26374 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 AC092299.1-201ENST00000632679 757 ntBASIC17.37■□□□□ 0.37
CHMLP26374 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.37■□□□□ 0.37
CHMLP26374 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.37■□□□□ 0.37
CHMLP26374 AC004899.1-201ENST00000424687 1714 ntBASIC17.37■□□□□ 0.37
CHMLP26374 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.37■□□□□ 0.37
CHMLP26374 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMLP26374 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms