Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC11.66□□□□□ -0.54
ACANP16112 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
ACANP16112 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
ACANP16112 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC11.66□□□□□ -0.54
ACANP16112 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC11.66□□□□□ -0.54
ACANP16112 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 AC008021.1-201ENST00000474180 414 ntBASIC11.66□□□□□ -0.54
ACANP16112 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC11.66□□□□□ -0.54
ACANP16112 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 IFNL3P1-201ENST00000595082 501 ntBASIC11.66□□□□□ -0.54
ACANP16112 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC11.66□□□□□ -0.54
ACANP16112 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 PKD1P1-201ENST00000458669 6805 ntBASIC11.66□□□□□ -0.54
ACANP16112 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.66□□□□□ -0.54
ACANP16112 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.66□□□□□ -0.54
ACANP16112 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
ACANP16112 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.66□□□□□ -0.54
ACANP16112 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
ACANP16112 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 SIRPB3P-201ENST00000340424 1216 ntBASIC11.66□□□□□ -0.54
ACANP16112 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC11.66□□□□□ -0.54
ACANP16112 AL359092.2-201ENST00000423330 585 ntBASIC11.66□□□□□ -0.54
ACANP16112 RPL18AP16-201ENST00000424057 531 ntBASIC11.66□□□□□ -0.54
ACANP16112 HNRNPA1P21-201ENST00000424115 961 ntBASIC11.66□□□□□ -0.54
ACANP16112 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC11.66□□□□□ -0.54
ACANP16112 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC11.66□□□□□ -0.54
ACANP16112 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC11.66□□□□□ -0.54
ACANP16112 AP000920.1-201ENST00000531824 344 ntBASIC11.66□□□□□ -0.54
ACANP16112 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC11.66□□□□□ -0.54
ACANP16112 AC140658.4-201ENST00000561990 352 ntBASIC11.66□□□□□ -0.54
ACANP16112 TYMSP2-201ENST00000589501 424 ntBASIC11.66□□□□□ -0.54
ACANP16112 AC022001.3-201ENST00000606330 596 ntBASIC11.66□□□□□ -0.54
ACANP16112 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC11.66□□□□□ -0.54
ACANP16112 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
ACANP16112 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC11.66□□□□□ -0.54
ACANP16112 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
ACANP16112 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ACANP16112 C18orf15-201ENST00000623680 2534 ntBASIC11.66□□□□□ -0.54
ACANP16112 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
ACANP16112 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC11.65□□□□□ -0.54
ACANP16112 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
ACANP16112 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC11.65□□□□□ -0.54
ACANP16112 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC11.65□□□□□ -0.54
ACANP16112 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
ACANP16112 SHMT1P1-201ENST00000419974 1312 ntBASIC11.65□□□□□ -0.54
ACANP16112 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.65□□□□□ -0.54
ACANP16112 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 GH1-203ENST00000351388 685 ntTSL 2 BASIC11.65□□□□□ -0.54
ACANP16112 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
ACANP16112 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.65□□□□□ -0.54
ACANP16112 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC11.65□□□□□ -0.54
ACANP16112 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC11.65□□□□□ -0.54
ACANP16112 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC11.65□□□□□ -0.54
ACANP16112 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.65□□□□□ -0.54
ACANP16112 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.65□□□□□ -0.54
ACANP16112 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
ACANP16112 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms