Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CCL2P13500 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL2P13500 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CCL2P13500 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CCL2P13500 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CCL2P13500 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CCL2P13500 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
CCL2P13500 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CCL2P13500 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 AC004899.1-201ENST00000424687 1714 ntBASIC12.65□□□□□ -0.38
CCL2P13500 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL2P13500 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 LINC02486-201ENST00000604157 3000 ntBASIC12.65□□□□□ -0.38
CCL2P13500 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CCL2P13500 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.65□□□□□ -0.38
CCL2P13500 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL2P13500 POM121L10P-201ENST00000436994 1285 ntBASIC12.65□□□□□ -0.38
CCL2P13500 AC012441.2-201ENST00000444843 739 ntBASIC12.65□□□□□ -0.38
CCL2P13500 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL2P13500 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.65□□□□□ -0.38
CCL2P13500 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.65□□□□□ -0.38
CCL2P13500 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL2P13500 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CCL2P13500 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.65□□□□□ -0.38
CCL2P13500 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CCL2P13500 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL2P13500 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
CCL2P13500 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL2P13500 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CCL2P13500 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CCL2P13500 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL2P13500 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.65□□□□□ -0.38
CCL2P13500 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL2P13500 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CCL2P13500 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL2P13500 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL2P13500 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
CCL2P13500 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.65□□□□□ -0.39
CCL2P13500 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
CCL2P13500 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CCL2P13500 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CCL2P13500 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CCL2P13500 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL2P13500 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL2P13500 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CCL2P13500 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL2P13500 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 SCARNA21-201ENST00000517026 139 ntBASIC12.64□□□□□ -0.39
CCL2P13500 AL160314.3-201ENST00000556041 767 ntBASIC12.64□□□□□ -0.39
CCL2P13500 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms