Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC175P0C221 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC175P0C221 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC175P0C221 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC175P0C221 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CCDC175P0C221 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC175P0C221 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC175P0C221 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC175P0C221 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC175P0C221 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC175P0C221 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC175P0C221 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC175P0C221 F2-205ENST00000530231 1849 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC175P0C221 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC175P0C221 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC175P0C221 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC175P0C221 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC175P0C221 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 MKRN5P-201ENST00000445263 1467 ntBASIC15.68■□□□□ 0.1
CCDC175P0C221 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC175P0C221 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CCDC175P0C221 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC175P0C221 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC175P0C221 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 AL161932.2-201ENST00000435436 679 ntBASIC15.68■□□□□ 0.1
CCDC175P0C221 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC175P0C221 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC175P0C221 TPRX2P-201ENST00000535362 881 ntBASIC15.68■□□□□ 0.1
CCDC175P0C221 AC023310.3-201ENST00000557027 670 ntBASIC15.68■□□□□ 0.1
CCDC175P0C221 AC100756.1-201ENST00000562736 682 ntBASIC15.68■□□□□ 0.1
CCDC175P0C221 SNHG9-202ENST00000564014 471 ntBASIC15.68■□□□□ 0.1
CCDC175P0C221 RRP7BP-205ENST00000566851 833 ntBASIC15.68■□□□□ 0.1
CCDC175P0C221 AC138749.3-201ENST00000567691 622 ntBASIC15.68■□□□□ 0.1
CCDC175P0C221 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC175P0C221 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC175P0C221 AC008738.7-201ENST00000609744 511 ntBASIC15.68■□□□□ 0.1
CCDC175P0C221 AC116165.1-201ENST00000611806 668 ntBASIC15.68■□□□□ 0.1
CCDC175P0C221 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCDC175P0C221 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC175P0C221 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC175P0C221 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCDC175P0C221 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC175P0C221 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC175P0C221 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC175P0C221 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC175P0C221 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC175P0C221 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC175P0C221 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC175P0C221 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CCDC175P0C221 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC175P0C221 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC175P0C221 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC175P0C221 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC175P0C221 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC175P0C221 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CCDC175P0C221 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC175P0C221 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC175P0C221 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC175P0C221 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC175P0C221 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC175P0C221 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CCDC175P0C221 AC136604.1-202ENST00000425471 771 ntBASIC15.67■□□□□ 0.1
CCDC175P0C221 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC175P0C221 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC175P0C221 AC027237.1-201ENST00000560942 655 ntBASIC15.67■□□□□ 0.1
CCDC175P0C221 AC005586.2-201ENST00000563946 837 ntBASIC15.67■□□□□ 0.1
CCDC175P0C221 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC175P0C221 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC175P0C221 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC175P0C221 AC104506.1-201ENST00000609247 429 ntBASIC15.67■□□□□ 0.1
CCDC175P0C221 AP005019.2-201ENST00000615104 511 ntBASIC15.67■□□□□ 0.1
CCDC175P0C221 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CCDC175P0C221 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC175P0C221 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC175P0C221 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms