Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHGBP05060 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CHGBP05060 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHGBP05060 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.28■□□□□ 0.36
CHGBP05060 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.28■□□□□ 0.36
CHGBP05060 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.28■□□□□ 0.36
CHGBP05060 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHGBP05060 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.27■□□□□ 0.36
CHGBP05060 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.27■□□□□ 0.36
CHGBP05060 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.27■□□□□ 0.36
CHGBP05060 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHGBP05060 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHGBP05060 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.27■□□□□ 0.36
CHGBP05060 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHGBP05060 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.27■□□□□ 0.36
CHGBP05060 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.27■□□□□ 0.36
CHGBP05060 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.27■□□□□ 0.36
CHGBP05060 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.27■□□□□ 0.36
CHGBP05060 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHGBP05060 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.27■□□□□ 0.36
CHGBP05060 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.27■□□□□ 0.36
CHGBP05060 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHGBP05060 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.27■□□□□ 0.36
CHGBP05060 RTN3P1-201ENST00000536295 711 ntBASIC17.27■□□□□ 0.36
CHGBP05060 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.27■□□□□ 0.36
CHGBP05060 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.27■□□□□ 0.36
CHGBP05060 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHGBP05060 MIR4754-201ENST00000582477 89 ntBASIC17.27■□□□□ 0.36
CHGBP05060 AC079336.7-201ENST00000623428 1078 ntBASIC17.27■□□□□ 0.36
CHGBP05060 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHGBP05060 LINC01815-202ENST00000641468 1409 ntBASIC17.27■□□□□ 0.35
CHGBP05060 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHGBP05060 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHGBP05060 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHGBP05060 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHGBP05060 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHGBP05060 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CHGBP05060 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHGBP05060 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHGBP05060 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHGBP05060 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHGBP05060 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHGBP05060 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CHGBP05060 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 FRMPD2B-201ENST00000431305 1347 ntBASIC17.26■□□□□ 0.35
CHGBP05060 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.26■□□□□ 0.35
CHGBP05060 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC17.26■□□□□ 0.35
CHGBP05060 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.26■□□□□ 0.35
CHGBP05060 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.26■□□□□ 0.35
CHGBP05060 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.26■□□□□ 0.35
CHGBP05060 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 AC242376.1-201ENST00000559033 726 ntBASIC17.26■□□□□ 0.35
CHGBP05060 AC026803.1-201ENST00000569130 274 ntBASIC17.26■□□□□ 0.35
CHGBP05060 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.26■□□□□ 0.35
CHGBP05060 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.26■□□□□ 0.35
CHGBP05060 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CHGBP05060 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.26■□□□□ 0.35
CHGBP05060 AC091812.3-201ENST00000621362 345 ntBASIC17.26■□□□□ 0.35
CHGBP05060 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.26■□□□□ 0.35
CHGBP05060 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 AL928654.5-201ENST00000624831 2501 ntBASIC17.26■□□□□ 0.35
CHGBP05060 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 AC090643.2-201ENST00000623442 2029 ntBASIC17.26■□□□□ 0.35
CHGBP05060 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 CAP2P1-201ENST00000557743 1390 ntBASIC17.26■□□□□ 0.35
CHGBP05060 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHGBP05060 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHGBP05060 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CHGBP05060 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHGBP05060 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHGBP05060 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.25■□□□□ 0.35
CHGBP05060 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC17.25■□□□□ 0.35
CHGBP05060 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.25■□□□□ 0.35
CHGBP05060 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms