Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBB4AP04350 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TUBB4AP04350 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.55■□□□□ 0.08
TUBB4AP04350 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC15.55■□□□□ 0.08
TUBB4AP04350 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
TUBB4AP04350 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBB4AP04350 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBB4AP04350 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBB4AP04350 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBB4AP04350 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBB4AP04350 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TUBB4AP04350 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TUBB4AP04350 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.55■□□□□ 0.08
TUBB4AP04350 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TUBB4AP04350 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TUBB4AP04350 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.55■□□□□ 0.08
TUBB4AP04350 SPDYE7P-202ENST00000420373 878 ntBASIC15.55■□□□□ 0.08
TUBB4AP04350 GPS2P2-201ENST00000430745 888 ntBASIC15.55■□□□□ 0.08
TUBB4AP04350 HLA-V-204ENST00000476601 1289 ntBASIC15.55■□□□□ 0.08
TUBB4AP04350 YBX1P5-201ENST00000509441 847 ntBASIC15.55■□□□□ 0.08
TUBB4AP04350 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.55■□□□□ 0.08
TUBB4AP04350 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TUBB4AP04350 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TUBB4AP04350 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBB4AP04350 MIR4469-201ENST00000583919 79 ntBASIC15.55■□□□□ 0.08
TUBB4AP04350 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.55■□□□□ 0.08
TUBB4AP04350 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.55■□□□□ 0.08
TUBB4AP04350 AL158212.4-201ENST00000624062 1286 ntBASIC15.55■□□□□ 0.08
TUBB4AP04350 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.55■□□□□ 0.08
TUBB4AP04350 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TUBB4AP04350 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TUBB4AP04350 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC15.55■□□□□ 0.08
TUBB4AP04350 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBB4AP04350 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TUBB4AP04350 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.54■□□□□ 0.08
TUBB4AP04350 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TUBB4AP04350 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TUBB4AP04350 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TUBB4AP04350 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TUBB4AP04350 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBB4AP04350 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.54■□□□□ 0.08
TUBB4AP04350 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBB4AP04350 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.54■□□□□ 0.08
TUBB4AP04350 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 AP006288.1-201ENST00000446065 395 ntBASIC15.54■□□□□ 0.08
TUBB4AP04350 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.54■□□□□ 0.08
TUBB4AP04350 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
TUBB4AP04350 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 AP001160.2-201ENST00000596071 487 ntBASIC15.54■□□□□ 0.08
TUBB4AP04350 AC022145.2-201ENST00000598203 171 ntBASIC15.54■□□□□ 0.08
TUBB4AP04350 AL596442.2-201ENST00000610240 980 ntBASIC15.54■□□□□ 0.08
TUBB4AP04350 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.54■□□□□ 0.08
TUBB4AP04350 AC004623.1-201ENST00000624592 2127 ntBASIC15.54■□□□□ 0.08
TUBB4AP04350 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.54■□□□□ 0.08
TUBB4AP04350 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TUBB4AP04350 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBB4AP04350 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBB4AP04350 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TUBB4AP04350 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TUBB4AP04350 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBB4AP04350 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms