Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-2O95096 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NKX2-2O95096 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX2-2O95096 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-2O95096 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NKX2-2O95096 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-2O95096 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-2O95096 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX2-2O95096 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.32□□□□□ -0.28
NKX2-2O95096 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX2-2O95096 AC078875.1-201ENST00000431907 724 ntBASIC13.32□□□□□ -0.28
NKX2-2O95096 AC092580.1-201ENST00000433998 658 ntBASIC13.32□□□□□ -0.28
NKX2-2O95096 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX2-2O95096 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-2O95096 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX2-2O95096 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.32□□□□□ -0.28
NKX2-2O95096 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.32□□□□□ -0.28
NKX2-2O95096 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.32□□□□□ -0.28
NKX2-2O95096 SNORD3B-2-202ENST00000571722 791 ntBASIC13.32□□□□□ -0.28
NKX2-2O95096 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX2-2O95096 AL136295.7-201ENST00000619226 1200 ntBASIC13.32□□□□□ -0.28
NKX2-2O95096 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.32□□□□□ -0.28
NKX2-2O95096 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-2O95096 AL033527.4-201ENST00000641026 673 ntBASIC13.32□□□□□ -0.28
NKX2-2O95096 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
NKX2-2O95096 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX2-2O95096 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
NKX2-2O95096 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NKX2-2O95096 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX2-2O95096 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
NKX2-2O95096 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX2-2O95096 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX2-2O95096 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-2O95096 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-2O95096 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-2O95096 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
NKX2-2O95096 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-2O95096 AC005840.4-201ENST00000541242 2494 ntBASIC13.31□□□□□ -0.28
NKX2-2O95096 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.31□□□□□ -0.28
NKX2-2O95096 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX2-2O95096 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-2O95096 AC104073.2-201ENST00000453737 312 ntBASIC13.31□□□□□ -0.28
NKX2-2O95096 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.31□□□□□ -0.28
NKX2-2O95096 SERPINA13P-202ENST00000478994 924 ntBASIC13.31□□□□□ -0.28
NKX2-2O95096 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.31□□□□□ -0.28
NKX2-2O95096 AC106794.1-201ENST00000506935 792 ntBASIC13.31□□□□□ -0.28
NKX2-2O95096 AC126915.1-201ENST00000522847 1038 ntBASIC13.31□□□□□ -0.28
NKX2-2O95096 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-2O95096 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.31□□□□□ -0.28
NKX2-2O95096 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-2O95096 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.31□□□□□ -0.28
NKX2-2O95096 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX2-2O95096 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.31□□□□□ -0.28
NKX2-2O95096 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX2-2O95096 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
NKX2-2O95096 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
NKX2-2O95096 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-2O95096 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 AP002353.1-201ENST00000528257 1599 ntBASIC13.31□□□□□ -0.28
NKX2-2O95096 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-2O95096 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-2O95096 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NKX2-2O95096 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms