Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHMP2AO43633 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHMP2AO43633 AHCYP4-201ENST00000419201 1315 ntBASIC16.28■□□□□ 0.2
CHMP2AO43633 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.28■□□□□ 0.2
CHMP2AO43633 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.28■□□□□ 0.2
CHMP2AO43633 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHMP2AO43633 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CHMP2AO43633 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.28■□□□□ 0.2
CHMP2AO43633 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHMP2AO43633 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CHMP2AO43633 ISCA2P1-201ENST00000425548 448 ntBASIC16.28■□□□□ 0.2
CHMP2AO43633 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.28■□□□□ 0.2
CHMP2AO43633 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.28■□□□□ 0.2
CHMP2AO43633 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.28■□□□□ 0.2
CHMP2AO43633 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.28■□□□□ 0.2
CHMP2AO43633 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CHMP2AO43633 MIR6074-201ENST00000612054 107 ntBASIC16.28■□□□□ 0.2
CHMP2AO43633 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.28■□□□□ 0.2
CHMP2AO43633 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CHMP2AO43633 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHMP2AO43633 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.28■□□□□ 0.2
CHMP2AO43633 AC023908.3-201ENST00000564211 3047 ntBASIC16.28■□□□□ 0.2
CHMP2AO43633 LINC01230-201ENST00000625222 3017 ntBASIC16.28■□□□□ 0.2
CHMP2AO43633 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.28■□□□□ 0.2
CHMP2AO43633 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP2AO43633 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.27■□□□□ 0.2
CHMP2AO43633 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CHMP2AO43633 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CHMP2AO43633 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CHMP2AO43633 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.27■□□□□ 0.2
CHMP2AO43633 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CHMP2AO43633 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.27■□□□□ 0.2
CHMP2AO43633 AL008707.1-201ENST00000422498 534 ntBASIC16.27■□□□□ 0.2
CHMP2AO43633 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.27■□□□□ 0.2
CHMP2AO43633 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.27■□□□□ 0.2
CHMP2AO43633 AC012618.1-201ENST00000461223 412 ntBASIC16.27■□□□□ 0.2
CHMP2AO43633 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CHMP2AO43633 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.27■□□□□ 0.2
CHMP2AO43633 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP2AO43633 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP2AO43633 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP2AO43633 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.19
CHMP2AO43633 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP2AO43633 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP2AO43633 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP2AO43633 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP2AO43633 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP2AO43633 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.27■□□□□ 0.19
CHMP2AO43633 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP2AO43633 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHMP2AO43633 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 AC090505.1-201ENST00000430515 1834 ntBASIC16.26■□□□□ 0.19
CHMP2AO43633 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP2AO43633 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP2AO43633 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP2AO43633 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
CHMP2AO43633 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CHMP2AO43633 AC064801.2-201ENST00000625052 1303 ntBASIC16.26■□□□□ 0.19
CHMP2AO43633 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms