Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMAD6O43541 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
SMAD6O43541 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMAD6O43541 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SMAD6O43541 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMAD6O43541 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SMAD6O43541 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SMAD6O43541 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SMAD6O43541 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SMAD6O43541 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.54□□□□□ -0.08
SMAD6O43541 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
SMAD6O43541 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SMAD6O43541 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.54□□□□□ -0.08
SMAD6O43541 OR8T1P-201ENST00000421347 918 ntBASIC14.54□□□□□ -0.08
SMAD6O43541 RPL8P2-201ENST00000430538 502 ntBASIC14.54□□□□□ -0.08
SMAD6O43541 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.54□□□□□ -0.08
SMAD6O43541 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.54□□□□□ -0.08
SMAD6O43541 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.54□□□□□ -0.08
SMAD6O43541 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.54□□□□□ -0.08
SMAD6O43541 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.54□□□□□ -0.08
SMAD6O43541 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.54□□□□□ -0.08
SMAD6O43541 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.54□□□□□ -0.08
SMAD6O43541 AC079328.1-201ENST00000560358 952 ntBASIC14.54□□□□□ -0.08
SMAD6O43541 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
SMAD6O43541 MIR3677-201ENST00000578964 60 ntBASIC14.54□□□□□ -0.08
SMAD6O43541 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.54□□□□□ -0.08
SMAD6O43541 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.54□□□□□ -0.08
SMAD6O43541 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
SMAD6O43541 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 FAM90A2P-201ENST00000511144 1395 ntBASIC14.54□□□□□ -0.08
SMAD6O43541 FAM90A25P-201ENST00000528404 1395 ntBASIC14.54□□□□□ -0.08
SMAD6O43541 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
SMAD6O43541 AC020910.6-201ENST00000623084 1459 ntBASIC14.54□□□□□ -0.08
SMAD6O43541 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SMAD6O43541 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SMAD6O43541 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.54□□□□□ -0.08
SMAD6O43541 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SMAD6O43541 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.54□□□□□ -0.08
SMAD6O43541 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SMAD6O43541 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.54□□□□□ -0.08
SMAD6O43541 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.54□□□□□ -0.08
SMAD6O43541 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.54□□□□□ -0.08
SMAD6O43541 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.54□□□□□ -0.08
SMAD6O43541 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SMAD6O43541 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMAD6O43541 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SMAD6O43541 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.53□□□□□ -0.08
SMAD6O43541 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.53□□□□□ -0.08
SMAD6O43541 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.53□□□□□ -0.08
SMAD6O43541 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SMAD6O43541 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 LINC01815-202ENST00000641468 1409 ntBASIC14.53□□□□□ -0.08
SMAD6O43541 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.53□□□□□ -0.08
SMAD6O43541 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.53□□□□□ -0.08
SMAD6O43541 LINC00115-201ENST00000473798 1317 ntBASIC14.53□□□□□ -0.08
SMAD6O43541 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMAD6O43541 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.53□□□□□ -0.08
SMAD6O43541 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.53□□□□□ -0.08
SMAD6O43541 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.53□□□□□ -0.08
SMAD6O43541 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.53□□□□□ -0.08
SMAD6O43541 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.53□□□□□ -0.08
SMAD6O43541 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.53□□□□□ -0.08
SMAD6O43541 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.53□□□□□ -0.08
SMAD6O43541 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SMAD6O43541 AC016629.1-201ENST00000596579 586 ntBASIC14.53□□□□□ -0.08
SMAD6O43541 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.53□□□□□ -0.08
SMAD6O43541 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms