Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.35■□□□□ 0.53
CHL1O00533 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.35■□□□□ 0.53
CHL1O00533 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.35■□□□□ 0.53
CHL1O00533 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC18.35■□□□□ 0.53
CHL1O00533 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.35■□□□□ 0.53
CHL1O00533 MIR6842-201ENST00000612539 65 ntBASIC18.35■□□□□ 0.53
CHL1O00533 AC242376.2-201ENST00000619355 883 ntBASIC18.35■□□□□ 0.53
CHL1O00533 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.35■□□□□ 0.53
CHL1O00533 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.35■□□□□ 0.53
CHL1O00533 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHL1O00533 AC026748.1-201ENST00000624349 3251 ntBASIC18.35■□□□□ 0.53
CHL1O00533 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC18.35■□□□□ 0.53
CHL1O00533 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHL1O00533 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHL1O00533 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHL1O00533 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHL1O00533 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHL1O00533 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC18.35■□□□□ 0.53
CHL1O00533 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHL1O00533 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHL1O00533 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC18.34■□□□□ 0.53
CHL1O00533 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.34■□□□□ 0.53
CHL1O00533 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC18.34■□□□□ 0.53
CHL1O00533 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CHL1O00533 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC18.34■□□□□ 0.53
CHL1O00533 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC18.34■□□□□ 0.53
CHL1O00533 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC18.34■□□□□ 0.53
CHL1O00533 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 AL590824.1-201ENST00000403828 1349 ntBASIC18.34■□□□□ 0.53
CHL1O00533 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 LINC00265-2P-201ENST00000413372 782 ntBASIC18.34■□□□□ 0.53
CHL1O00533 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.34■□□□□ 0.53
CHL1O00533 AC069218.1-201ENST00000435269 762 ntBASIC18.34■□□□□ 0.53
CHL1O00533 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CHL1O00533 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.34■□□□□ 0.53
CHL1O00533 CHCHD2P9-201ENST00000461726 456 ntBASIC18.34■□□□□ 0.53
CHL1O00533 RN7SL81P-201ENST00000493781 261 ntBASIC18.34■□□□□ 0.53
CHL1O00533 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.34■□□□□ 0.53
CHL1O00533 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CHL1O00533 KLF17P1-201ENST00000547105 1126 ntBASIC18.34■□□□□ 0.53
CHL1O00533 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.34■□□□□ 0.53
CHL1O00533 MIR4706-201ENST00000582134 82 ntBASIC18.34■□□□□ 0.53
CHL1O00533 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.34■□□□□ 0.53
CHL1O00533 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.34■□□□□ 0.53
CHL1O00533 AL805961.1-201ENST00000642026 753 ntBASIC18.34■□□□□ 0.53
CHL1O00533 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.34■□□□□ 0.53
CHL1O00533 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CHL1O00533 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC18.34■□□□□ 0.53
CHL1O00533 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC18.34■□□□□ 0.53
CHL1O00533 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHL1O00533 KRT8P43-201ENST00000406052 1458 ntBASIC18.33■□□□□ 0.53
CHL1O00533 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHL1O00533 AL157996.1-201ENST00000624684 2299 ntBASIC18.33■□□□□ 0.53
CHL1O00533 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
CHL1O00533 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHL1O00533 AC074138.1-201ENST00000611182 1303 ntBASIC18.33■□□□□ 0.53
CHL1O00533 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHL1O00533 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHL1O00533 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CHL1O00533 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHL1O00533 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHL1O00533 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHL1O00533 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.33■□□□□ 0.52
CHL1O00533 AC092506.1-202ENST00000401022 528 ntBASIC18.33■□□□□ 0.52
CHL1O00533 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHL1O00533 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC18.33■□□□□ 0.52
CHL1O00533 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHL1O00533 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC18.33■□□□□ 0.52
CHL1O00533 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC18.33■□□□□ 0.52
CHL1O00533 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHL1O00533 NOC2LP1-201ENST00000450578 752 ntBASIC18.33■□□□□ 0.52
CHL1O00533 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC18.33■□□□□ 0.52
CHL1O00533 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.33■□□□□ 0.52
CHL1O00533 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.33■□□□□ 0.52
CHL1O00533 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC18.33■□□□□ 0.52
CHL1O00533 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.33■□□□□ 0.52
CHL1O00533 AC092171.5-201ENST00000608012 942 ntBASIC18.33■□□□□ 0.52
CHL1O00533 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CHL1O00533 AC025262.2-201ENST00000623975 1056 ntBASIC18.33■□□□□ 0.52
CHL1O00533 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHL1O00533 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHL1O00533 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHL1O00533 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC18.33■□□□□ 0.52
CHL1O00533 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHL1O00533 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHL1O00533 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CHL1O00533 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms