Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC188H7C350 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.08■□□□□ 0.01
CCDC188H7C350 AC024075.2-201ENST00000598112 1473 ntBASIC15.08■□□□□ 0.01
CCDC188H7C350 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
CCDC188H7C350 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CCDC188H7C350 TSN-212ENST00000536142 3328 ntTSL 2 BASIC15.08■□□□□ 0
CCDC188H7C350 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
CCDC188H7C350 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.08■□□□□ 0
CCDC188H7C350 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.08■□□□□ 0
CCDC188H7C350 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.08■□□□□ 0
CCDC188H7C350 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.08■□□□□ 0
CCDC188H7C350 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.08■□□□□ 0
CCDC188H7C350 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC15.08■□□□□ 0
CCDC188H7C350 AC123567.1-201ENST00000548294 1261 ntBASIC15.08■□□□□ 0
CCDC188H7C350 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.08■□□□□ 0
CCDC188H7C350 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.08■□□□□ 0
CCDC188H7C350 RN7SL48P-201ENST00000579283 293 ntBASIC15.08■□□□□ 0
CCDC188H7C350 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.08■□□□□ 0
CCDC188H7C350 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.08■□□□□ 0
CCDC188H7C350 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.08■□□□□ 0
CCDC188H7C350 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.08■□□□□ 0
CCDC188H7C350 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.08■□□□□ 0
CCDC188H7C350 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC188H7C350 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.08■□□□□ 0
CCDC188H7C350 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC15.07■□□□□ 0
CCDC188H7C350 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCDC188H7C350 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.07■□□□□ 0
CCDC188H7C350 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 ABCD1P2-201ENST00000429313 1601 ntBASIC15.07■□□□□ 0
CCDC188H7C350 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CCDC188H7C350 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.07■□□□□ 0
CCDC188H7C350 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCDC188H7C350 AL355102.3-201ENST00000554299 1678 ntBASIC15.07■□□□□ 0
CCDC188H7C350 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CCDC188H7C350 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CCDC188H7C350 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCDC188H7C350 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC15.07■□□□□ 0
CCDC188H7C350 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.07■□□□□ 0
CCDC188H7C350 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.07■□□□□ 0
CCDC188H7C350 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 AC093433.1-201ENST00000458048 571 ntBASIC15.07■□□□□ 0
CCDC188H7C350 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CCDC188H7C350 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.07■□□□□ 0
CCDC188H7C350 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.07■□□□□ 0
CCDC188H7C350 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCDC188H7C350 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.07■□□□□ 0
CCDC188H7C350 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.07■□□□□ 0
CCDC188H7C350 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
CCDC188H7C350 LINC02486-201ENST00000604157 3000 ntBASIC15.07■□□□□ 0
CCDC188H7C350 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
CCDC188H7C350 AC009093.2-202ENST00000620513 2079 ntBASIC15.07■□□□□ 0
CCDC188H7C350 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCDC188H7C350 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC188H7C350 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.06■□□□□ 0
CCDC188H7C350 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.06■□□□□ 0
CCDC188H7C350 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms