Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CAMTA2-208ENST00000572543 4496 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 KIF24-202ENST00000402558 6131 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 FCRLA-206ENST00000367949 1792 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 USP1-201ENST00000339950 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 TMPRSS3-201ENST00000291532 3193 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 POM121L6P-201ENST00000441186 1826 ntBASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 BAALC-202ENST00000306391 243 ntTSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 BAALC-204ENST00000330955 222 ntTSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 MEG3-211ENST00000452514 461 ntTSL 3 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 VENTXP7-201ENST00000475503 772 ntBASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 MMAB-206ENST00000540016 945 ntTSL 3 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 AL137784.2-201ENST00000607332 1000 ntBASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 RUBCN-201ENST00000273582 6955 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 SCN1B-208ENST00000640135 4846 ntTSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 IGHMBP2-201ENST00000255078 3961 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 SLC39A9-201ENST00000031146 5192 ntTSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 RCAN1-214ENST00000620920 2257 ntTSL 4 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 PCSK2-201ENST00000262545 4740 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 AL365181.2-201ENST00000606343 3222 ntBASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 DSG4-202ENST00000359747 4526 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 RIPOR3-201ENST00000045083 4279 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 KRBA1-201ENST00000319551 4020 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 PES1-203ENST00000402281 2760 ntTSL 2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 PKP4P1-201ENST00000426801 2158 ntBASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 WDR36-206ENST00000612402 6592 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 ZFAT-208ENST00000520356 4273 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 JAK1-201ENST00000342505 5047 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 Z83836.1-201ENST00000624605 1642 ntBASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 LRRC8A-202ENST00000372599 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHKB-CPT1BH3BT56 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms