Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 ST13P19-201ENST00000442505 1124 ntBASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 MIR3677-201ENST00000578964 60 ntBASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 MEG3_2.1-201ENST00000611456 105 ntBASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
CTDP1Q9Y5B0 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 AC074138.1-201ENST00000611182 1303 ntBASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 TP73-203ENST00000357733 4899 ntTSL 5 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 AL807761.2-201ENST00000422849 729 ntBASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 AC079112.1-201ENST00000454972 939 ntBASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 AC008267.1-201ENST00000474858 1069 ntBASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 AC005586.2-201ENST00000563946 837 ntBASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 MIR3147-201ENST00000577811 66 ntBASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 U62317.3-201ENST00000608319 855 ntBASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 AL805961.1-201ENST00000642026 753 ntBASIC16.72■□□□□ 0.27
CTDP1Q9Y5B0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms