Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 ACTG1P2-201ENST00000415776 1125 ntBASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 ACTG1P11-201ENST00000425411 1125 ntBASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 Z97180.1-201ENST00000445173 988 ntBASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 MIR3619-201ENST00000579667 83 ntBASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 AL132994.2-201ENST00000603120 687 ntBASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 AP000346.4-201ENST00000614827 381 ntBASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 AP001505.2-201ENST00000616815 443 ntBASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIP2Q9UDT6 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 AC144522.1-201ENST00000625111 1658 ntBASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 AC009779.1-201ENST00000551138 283 ntBASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 AC138627.1-207ENST00000641560 1006 ntBASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLIP2Q9UDT6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLIP2Q9UDT6 TMBIM7P-202ENST00000641474 1516 ntBASIC17.21■□□□□ 0.34
CLIP2Q9UDT6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLIP2Q9UDT6 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.21■□□□□ 0.34
CLIP2Q9UDT6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 AL157791.1-201ENST00000553667 1699 ntBASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 AC008132.1-202ENST00000342005 1389 ntBASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 RN7SKP214-201ENST00000364208 315 ntBASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 AC067750.1-201ENST00000608826 6545 ntBASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIP2Q9UDT6 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC17.19■□□□□ 0.34
CLIP2Q9UDT6 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIP2Q9UDT6 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms