Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CD248Q9HCU0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 HLA-K-203ENST00000430151 1046 ntBASIC15.36■□□□□ 0.05
CD248Q9HCU0 FAM8A4P-201ENST00000435433 1213 ntBASIC15.36■□□□□ 0.05
CD248Q9HCU0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CD248Q9HCU0 SCARNA20.5-201ENST00000516991 142 ntBASIC15.36■□□□□ 0.05
CD248Q9HCU0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CD248Q9HCU0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 DUX4L47-201ENST00000566374 394 ntBASIC15.36■□□□□ 0.05
CD248Q9HCU0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD248Q9HCU0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.36■□□□□ 0.05
CD248Q9HCU0 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD248Q9HCU0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD248Q9HCU0 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.36■□□□□ 0.05
CD248Q9HCU0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD248Q9HCU0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD248Q9HCU0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD248Q9HCU0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.35■□□□□ 0.05
CD248Q9HCU0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 AC004945.1-201ENST00000416738 983 ntBASIC15.35■□□□□ 0.05
CD248Q9HCU0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 AC079178.1-201ENST00000420915 656 ntBASIC15.35■□□□□ 0.05
CD248Q9HCU0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 CHMP1AP1-201ENST00000445563 662 ntBASIC15.35■□□□□ 0.05
CD248Q9HCU0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 HIST2H2BC-201ENST00000498492 580 ntBASIC15.35■□□□□ 0.05
CD248Q9HCU0 COX5BP1-201ENST00000507622 393 ntBASIC15.35■□□□□ 0.05
CD248Q9HCU0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 RHOQP1-201ENST00000555758 579 ntBASIC15.35■□□□□ 0.05
CD248Q9HCU0 AC106820.3-201ENST00000561653 397 ntBASIC15.35■□□□□ 0.05
CD248Q9HCU0 RN7SL713P-201ENST00000582127 302 ntBASIC15.35■□□□□ 0.05
CD248Q9HCU0 AL603764.1-201ENST00000636452 321 ntBASIC15.35■□□□□ 0.05
CD248Q9HCU0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.35■□□□□ 0.05
CD248Q9HCU0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD248Q9HCU0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CD248Q9HCU0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CD248Q9HCU0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms