Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTFDC1Q9BY42 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.29■□□□□ 0.36
RTFDC1Q9BY42 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTFDC1Q9BY42 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTFDC1Q9BY42 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTFDC1Q9BY42 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTFDC1Q9BY42 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTFDC1Q9BY42 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RTFDC1Q9BY42 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.29■□□□□ 0.36
RTFDC1Q9BY42 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RTFDC1Q9BY42 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTFDC1Q9BY42 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTFDC1Q9BY42 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTFDC1Q9BY42 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 VENTXP4-201ENST00000449029 958 ntBASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 AL451000.1-201ENST00000451300 1186 ntBASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 CES1P2-201ENST00000566467 1242 ntBASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 AP000769.1-203ENST00000637245 208 ntBASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.28■□□□□ 0.36
RTFDC1Q9BY42 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 KRT8P43-201ENST00000406052 1458 ntBASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 AP000354.1-201ENST00000396982 456 ntBASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 GALP-202ENST00000440823 889 ntTSL 5 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 BATF-202ENST00000555504 361 ntTSL 2 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTFDC1Q9BY42 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTFDC1Q9BY42 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms