Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP3Q9BWW4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 SLC25A24P2-201ENST00000415059 510 ntBASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 AL645933.1-201ENST00000440087 609 ntBASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 HLA-J-204ENST00000495278 958 ntBASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 AL160314.3-201ENST00000556041 767 ntBASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 AC103988.2-201ENST00000561804 725 ntBASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 AL132994.2-201ENST00000603120 687 ntBASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 KRT8P28-201ENST00000433288 1390 ntBASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 FGD5P1-202ENST00000614866 2498 ntBASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.15□□□□□ -0.46
SSBP3Q9BWW4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SSBP3Q9BWW4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SSBP3Q9BWW4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SSBP3Q9BWW4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SSBP3Q9BWW4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SSBP3Q9BWW4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.15□□□□□ -0.47
SSBP3Q9BWW4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 AC144522.1-201ENST00000625111 1658 ntBASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 VDAC1P1-201ENST00000439229 848 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms