Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
IFT140Q96RY7 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
IFT140Q96RY7 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
IFT140Q96RY7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
IFT140Q96RY7 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
IFT140Q96RY7 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 SNORA47-201ENST00000458862 138 ntBASIC22.96■■□□□ 1.27
IFT140Q96RY7 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC22.96■■□□□ 1.27
IFT140Q96RY7 AC136475.7-201ENST00000602949 592 ntBASIC22.96■■□□□ 1.27
IFT140Q96RY7 AC009812.1-201ENST00000605948 1059 ntBASIC22.96■■□□□ 1.27
IFT140Q96RY7 AL109954.3-201ENST00000615088 558 ntBASIC22.96■■□□□ 1.27
IFT140Q96RY7 SNORA50D-202ENST00000627561 132 ntBASIC22.96■■□□□ 1.27
IFT140Q96RY7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
IFT140Q96RY7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
IFT140Q96RY7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
IFT140Q96RY7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC22.95■■□□□ 1.27
IFT140Q96RY7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
IFT140Q96RY7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC22.95■■□□□ 1.27
IFT140Q96RY7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
IFT140Q96RY7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 RBMXP1-201ENST00000408004 1191 ntBASIC22.95■■□□□ 1.26
IFT140Q96RY7 AP001331.1-201ENST00000413008 1015 ntBASIC22.95■■□□□ 1.26
IFT140Q96RY7 AL121994.1-201ENST00000413189 402 ntBASIC22.95■■□□□ 1.26
IFT140Q96RY7 AC069421.1-201ENST00000447462 323 ntBASIC22.95■■□□□ 1.26
IFT140Q96RY7 RPSAP16-201ENST00000447583 821 ntBASIC22.95■■□□□ 1.26
IFT140Q96RY7 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC22.95■■□□□ 1.26
IFT140Q96RY7 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC22.95■■□□□ 1.26
IFT140Q96RY7 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 AL136298.3-201ENST00000556746 445 ntBASIC22.95■■□□□ 1.26
IFT140Q96RY7 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC22.95■■□□□ 1.26
IFT140Q96RY7 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC22.95■■□□□ 1.26
IFT140Q96RY7 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC22.95■■□□□ 1.26
IFT140Q96RY7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC22.95■■□□□ 1.26
IFT140Q96RY7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC22.95■■□□□ 1.26
IFT140Q96RY7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
IFT140Q96RY7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
IFT140Q96RY7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
IFT140Q96RY7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
IFT140Q96RY7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
IFT140Q96RY7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 AL031577.1-201ENST00000339867 399 ntBASIC22.94■■□□□ 1.26
IFT140Q96RY7 USP17L6P-201ENST00000382470 1197 ntBASIC22.94■■□□□ 1.26
IFT140Q96RY7 PPP1R2P10-201ENST00000393023 595 ntBASIC22.94■■□□□ 1.26
IFT140Q96RY7 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 AC007881.1-201ENST00000437460 187 ntBASIC22.94■■□□□ 1.26
IFT140Q96RY7 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
IFT140Q96RY7 MTHFD2P7-201ENST00000483867 983 ntBASIC22.94■■□□□ 1.26
IFT140Q96RY7 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 AC011498.7-201ENST00000624986 2027 ntBASIC22.94■■□□□ 1.26
IFT140Q96RY7 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
IFT140Q96RY7 RNF165-205ENST00000588679 2904 ntBASIC22.94■■□□□ 1.26
IFT140Q96RY7 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
IFT140Q96RY7 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
IFT140Q96RY7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
IFT140Q96RY7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC22.94■■□□□ 1.26
IFT140Q96RY7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
IFT140Q96RY7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC22.93■■□□□ 1.26
IFT140Q96RY7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
IFT140Q96RY7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
IFT140Q96RY7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
IFT140Q96RY7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
IFT140Q96RY7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC22.93■■□□□ 1.26
IFT140Q96RY7 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
IFT140Q96RY7 KLK8-203ENST00000347619 555 ntTSL 2 BASIC22.93■■□□□ 1.26
IFT140Q96RY7 MIR193A-201ENST00000384882 88 ntBASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms