Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 FAM220BP-201ENST00000377689 816 ntBASIC13.69□□□□□ -0.22
NR1H4Q96RI1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 AC002056.1-201ENST00000395613 760 ntBASIC13.69□□□□□ -0.22
NR1H4Q96RI1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 LINC00638-201ENST00000555578 2518 ntBASIC13.69□□□□□ -0.22
NR1H4Q96RI1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 MSNP1-201ENST00000511640 1732 ntBASIC13.69□□□□□ -0.22
NR1H4Q96RI1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 ZNF259P1-201ENST00000407656 1365 ntBASIC13.69□□□□□ -0.22
NR1H4Q96RI1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR1H4Q96RI1 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 KRT8P14-201ENST00000414254 1442 ntBASIC13.68□□□□□ -0.22
NR1H4Q96RI1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 RNA5SP416-201ENST00000516838 111 ntBASIC13.68□□□□□ -0.22
NR1H4Q96RI1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 AC004623.1-201ENST00000624592 2127 ntBASIC13.68□□□□□ -0.22
NR1H4Q96RI1 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 MAPK10-262ENST00000641051 5738 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms