Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AC098935.1-201ENST00000446057 611 ntBASIC15.68■□□□□ 0.1
PGBD4Q96DM1 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AC008267.1-201ENST00000474858 1069 ntBASIC15.68■□□□□ 0.1
PGBD4Q96DM1 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AL031713.1-201ENST00000564813 661 ntBASIC15.68■□□□□ 0.1
PGBD4Q96DM1 MIR3147-201ENST00000577811 66 ntBASIC15.68■□□□□ 0.1
PGBD4Q96DM1 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 SIGLEC18P-201ENST00000602271 909 ntBASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AC007326.1-201ENST00000604539 458 ntBASIC15.68■□□□□ 0.1
PGBD4Q96DM1 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AC090386.2-201ENST00000623010 1039 ntBASIC15.68■□□□□ 0.1
PGBD4Q96DM1 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AL805961.1-201ENST00000642026 753 ntBASIC15.68■□□□□ 0.1
PGBD4Q96DM1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AC018529.2-202ENST00000611482 3087 ntBASIC15.68■□□□□ 0.1
PGBD4Q96DM1 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AC074138.1-201ENST00000611182 1303 ntBASIC15.68■□□□□ 0.1
PGBD4Q96DM1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 AP002353.1-201ENST00000528257 1599 ntBASIC15.67■□□□□ 0.1
PGBD4Q96DM1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 AC023908.3-201ENST00000564211 3047 ntBASIC15.67■□□□□ 0.1
PGBD4Q96DM1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 AP000356.3-201ENST00000382243 753 ntBASIC15.67■□□□□ 0.1
PGBD4Q96DM1 MIR557-201ENST00000385239 98 ntBASIC15.67■□□□□ 0.1
PGBD4Q96DM1 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 AL807761.2-201ENST00000422849 729 ntBASIC15.67■□□□□ 0.1
PGBD4Q96DM1 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 SORD2P-201ENST00000558556 1069 ntBASIC15.67■□□□□ 0.1
PGBD4Q96DM1 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 AC073352.2-201ENST00000609385 439 ntBASIC15.67■□□□□ 0.1
PGBD4Q96DM1 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.67■□□□□ 0.1
PGBD4Q96DM1 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms