Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 AC015802.1-201ENST00000588104 1449 ntBASIC12.88□□□□□ -0.35
APH1AQ96BI3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 AC078875.1-201ENST00000431907 724 ntBASIC12.87□□□□□ -0.35
APH1AQ96BI3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 SNORD3B-2-202ENST00000571722 791 ntBASIC12.87□□□□□ -0.35
APH1AQ96BI3 AC103810.3-201ENST00000583567 96 ntBASIC12.87□□□□□ -0.35
APH1AQ96BI3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 PEG13-201ENST00000631594 5667 ntBASIC12.87□□□□□ -0.35
APH1AQ96BI3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 AHCYP4-201ENST00000419201 1315 ntBASIC12.87□□□□□ -0.35
APH1AQ96BI3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APH1AQ96BI3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.87□□□□□ -0.35
APH1AQ96BI3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APH1AQ96BI3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APH1AQ96BI3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 CYP4F23P-201ENST00000593402 1579 ntBASIC12.86□□□□□ -0.35
APH1AQ96BI3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APH1AQ96BI3 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
APH1AQ96BI3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
APH1AQ96BI3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
APH1AQ96BI3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
APH1AQ96BI3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
APH1AQ96BI3 AL008707.1-201ENST00000422498 534 ntBASIC12.86□□□□□ -0.35
APH1AQ96BI3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms