Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 AL807761.2-201ENST00000422849 729 ntBASIC14.43□□□□□ -0.1
CHD5Q8TDI0 AC026320.2-201ENST00000434379 478 ntBASIC14.43□□□□□ -0.1
CHD5Q8TDI0 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 Z97180.1-201ENST00000445173 988 ntBASIC14.43□□□□□ -0.1
CHD5Q8TDI0 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 CHCHD2P2-201ENST00000503744 321 ntBASIC14.43□□□□□ -0.1
CHD5Q8TDI0 TMCO5B-205ENST00000530020 894 ntBASIC14.43□□□□□ -0.1
CHD5Q8TDI0 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 AC012044.1-201ENST00000603431 297 ntBASIC14.43□□□□□ -0.1
CHD5Q8TDI0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 AC117503.4-201ENST00000623229 1418 ntBASIC14.43□□□□□ -0.1
CHD5Q8TDI0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 LINC01230-201ENST00000625222 3017 ntBASIC14.43□□□□□ -0.1
CHD5Q8TDI0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 DUX4L50-201ENST00000455245 715 ntBASIC14.43□□□□□ -0.1
CHD5Q8TDI0 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 AC025262.2-201ENST00000623975 1056 ntBASIC14.43□□□□□ -0.1
CHD5Q8TDI0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 RPL13AP3-202ENST00000494676 1473 ntBASIC14.43□□□□□ -0.1
CHD5Q8TDI0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHD5Q8TDI0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 AL512430.1-201ENST00000392575 860 ntBASIC14.42□□□□□ -0.1
CHD5Q8TDI0 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 C8orf49-201ENST00000525043 1968 ntBASIC14.42□□□□□ -0.1
CHD5Q8TDI0 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHD5Q8TDI0 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms