Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 AC139712.1-201ENST00000378256 1875 ntBASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3IL1Q8TBN0 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 AL157996.1-201ENST00000624684 2299 ntBASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 MIR770-201ENST00000390219 98 ntBASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 CNN2P2-201ENST00000443536 909 ntBASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 CNN2P3-201ENST00000450201 906 ntBASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 AC025678.2-201ENST00000562061 970 ntBASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 AC138761.1-201ENST00000584393 385 ntBASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 AL136317.3-201ENST00000618497 906 ntBASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 NCLP1-201ENST00000445357 1963 ntBASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB3IL1Q8TBN0 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 MEX3B-202ENST00000558133 4333 ntBASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 VDAC1P7-201ENST00000462417 847 ntBASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 AC069120.2-201ENST00000524091 540 ntBASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 AC027369.6-201ENST00000525520 931 ntBASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 RARRES2P5-201ENST00000564013 466 ntBASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 AC007431.3-201ENST00000623221 587 ntBASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms