Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 ELK2AP-201ENST00000392510 1007 ntBASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 RN7SL530P-201ENST00000485097 298 ntBASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 AL109837.1-201ENST00000603272 613 ntBASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 MIR6769A-201ENST00000617340 73 ntBASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ARHGEF39Q8N4T4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.58□□□□□ -0.23
ARHGEF39Q8N4T4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.58□□□□□ -0.23
ARHGEF39Q8N4T4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.58□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ARHGEF39Q8N4T4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ARHGEF39Q8N4T4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.58□□□□□ -0.23
ARHGEF39Q8N4T4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ARHGEF39Q8N4T4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 BANF1P3-201ENST00000412556 261 ntBASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 OR8T1P-201ENST00000421347 918 ntBASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 DUX4L50-201ENST00000455245 715 ntBASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 KRT18P15-201ENST00000458108 1291 ntBASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 RN7SL720P-201ENST00000488178 304 ntBASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 AC245884.6-201ENST00000515672 1067 ntBASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 AL009178.2-201ENST00000597278 2719 ntBASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ARHGEF39Q8N4T4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms