Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM48Q8IWZ4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 AC015688.4-201ENST00000580780 1647 ntBASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 AC016700.1-201ENST00000429424 312 ntBASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 MBLAC2-202ENST00000514906 1936 ntBASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 AL137784.3-201ENST00000623858 2288 ntBASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM48Q8IWZ4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 LINC00552-201ENST00000625151 2579 ntBASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 SLC25A24P2-201ENST00000415059 510 ntBASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 AL157407.1-201ENST00000435784 904 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms