Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.3□□□□□ -0.6
KCNIP4Q6PIL6 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 AC007967.2-201ENST00000432613 625 ntBASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 AC140658.5-201ENST00000438532 169 ntBASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 AC009078.2-202ENST00000463353 338 ntBASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 AC004877.2-201ENST00000623941 599 ntBASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 IL9RP2-201ENST00000423948 1312 ntBASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KCNIP4Q6PIL6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 AC025580.3-201ENST00000617932 1424 ntBASIC11.28□□□□□ -0.6
KCNIP4Q6PIL6 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms